9 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_037500	Complex 1 LYR protein; Belongs to the complex I LYR family. (99 aa)
	PEX2_020070	NADH:ubiquinone oxidoreductase intermediate-associated protein 30. (344 aa)
	PEX2_099320	NADH-quinone oxidoreductase, chain I. (220 aa)
	PEX2_046020	DUF3824 domain-containing protein. (873 aa)
	PEX2_071060	Zinc finger, CHCC-type. (213 aa)
	PEX2_003170	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family. (473 aa)
	PEX2_060180	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (159 aa)
	PEX2_024170	NADH:ubiquinone oxidoreductase, ASHI subunit. (153 aa)
	PEX2_024030	Uncharacterized protein. (513 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_003170	PEX2_020070	A0A0A2JQM6	A0A0A2KH76	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.	NADH:ubiquinone oxidoreductase intermediate-associated protein 30.	0.813
PEX2_003170	PEX2_024030	A0A0A2JQM6	A0A0A2IJ07	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.	Uncharacterized protein.	0.994
PEX2_003170	PEX2_024170	A0A0A2JQM6	A0A0A2IKT4	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.	NADH:ubiquinone oxidoreductase, ASHI subunit.	0.994
PEX2_003170	PEX2_037500	A0A0A2JQM6	A0A0A2HYQ0	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.	Complex 1 LYR protein; Belongs to the complex I LYR family.	0.998
PEX2_003170	PEX2_046020	A0A0A2JQM6	A0A0A2K6U1	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.	DUF3824 domain-containing protein.	0.997
PEX2_003170	PEX2_060180	A0A0A2JQM6	A0A0A2JF56	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
PEX2_003170	PEX2_071060	A0A0A2JQM6	A0A0A2I574	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.	Zinc finger, CHCC-type.	0.999
PEX2_003170	PEX2_099320	A0A0A2JQM6	A0A0A2KDM7	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.	NADH-quinone oxidoreductase, chain I.	0.999
PEX2_020070	PEX2_003170	A0A0A2KH76	A0A0A2JQM6	NADH:ubiquinone oxidoreductase intermediate-associated protein 30.	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.	0.813
PEX2_020070	PEX2_024030	A0A0A2KH76	A0A0A2IJ07	NADH:ubiquinone oxidoreductase intermediate-associated protein 30.	Uncharacterized protein.	0.701
PEX2_020070	PEX2_024170	A0A0A2KH76	A0A0A2IKT4	NADH:ubiquinone oxidoreductase intermediate-associated protein 30.	NADH:ubiquinone oxidoreductase, ASHI subunit.	0.701
PEX2_020070	PEX2_037500	A0A0A2KH76	A0A0A2HYQ0	NADH:ubiquinone oxidoreductase intermediate-associated protein 30.	Complex 1 LYR protein; Belongs to the complex I LYR family.	0.796
PEX2_020070	PEX2_046020	A0A0A2KH76	A0A0A2K6U1	NADH:ubiquinone oxidoreductase intermediate-associated protein 30.	DUF3824 domain-containing protein.	0.658
PEX2_020070	PEX2_060180	A0A0A2KH76	A0A0A2JF56	NADH:ubiquinone oxidoreductase intermediate-associated protein 30.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.953
PEX2_020070	PEX2_071060	A0A0A2KH76	A0A0A2I574	NADH:ubiquinone oxidoreductase intermediate-associated protein 30.	Zinc finger, CHCC-type.	0.830
PEX2_020070	PEX2_099320	A0A0A2KH76	A0A0A2KDM7	NADH:ubiquinone oxidoreductase intermediate-associated protein 30.	NADH-quinone oxidoreductase, chain I.	0.801
PEX2_024030	PEX2_003170	A0A0A2IJ07	A0A0A2JQM6	Uncharacterized protein.	NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.	0.994
PEX2_024030	PEX2_020070	A0A0A2IJ07	A0A0A2KH76	Uncharacterized protein.	NADH:ubiquinone oxidoreductase intermediate-associated protein 30.	0.701
PEX2_024030	PEX2_037500	A0A0A2IJ07	A0A0A2HYQ0	Uncharacterized protein.	Complex 1 LYR protein; Belongs to the complex I LYR family.	0.995
PEX2_024030	PEX2_046020	A0A0A2IJ07	A0A0A2K6U1	Uncharacterized protein.	DUF3824 domain-containing protein.	0.982