12 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_009590	DNA ligase. (824 aa)
	PEX2_068430	DNA repair metallo-beta-lactamase. (846 aa)
	PEX2_035860	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. (712 aa)
	PEX2_021140	Recombination/repair protein Rad50. (1383 aa)
	PEX2_073500	DNA helicase, ATP-dependent, Ku type. (653 aa)
	PEX2_055210	DNA ligase, ATP-dependent, N-terminal. (1047 aa)
	PEX2_011170	Mre11, DNA-binding; Belongs to the MRE11/RAD32 family. (1382 aa)
	PEX2_082570	Uncharacterized protein. (623 aa)
	PEX2_100590	DNA polymerase family X. (713 aa)
	PEX2_047120	DNA polymerase family X. (633 aa)
	PEX2_059120	Uncharacterized protein. (560 aa)
	PEX2_071530	DNA repair metallo-beta-lactamase. (725 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_009590	PEX2_011170	A0A0A2J7J3	A0A0A2K8W4	DNA ligase.	Mre11, DNA-binding; Belongs to the MRE11/RAD32 family.	0.775
PEX2_009590	PEX2_021140	A0A0A2J7J3	A0A0A2K031	DNA ligase.	Recombination/repair protein Rad50.	0.808
PEX2_009590	PEX2_035860	A0A0A2J7J3	A0A0A2JXC9	DNA ligase.	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.	0.926
PEX2_009590	PEX2_047120	A0A0A2J7J3	A0A0A2I9E2	DNA ligase.	DNA polymerase family X.	0.834
PEX2_009590	PEX2_055210	A0A0A2J7J3	A0A0A2K5N9	DNA ligase.	DNA ligase, ATP-dependent, N-terminal.	0.643
PEX2_009590	PEX2_068430	A0A0A2J7J3	A0A0A2JUK0	DNA ligase.	DNA repair metallo-beta-lactamase.	0.720
PEX2_009590	PEX2_071530	A0A0A2J7J3	A0A0A2JR32	DNA ligase.	DNA repair metallo-beta-lactamase.	0.714
PEX2_009590	PEX2_073500	A0A0A2J7J3	A0A0A2K4M6	DNA ligase.	DNA helicase, ATP-dependent, Ku type.	0.902
PEX2_009590	PEX2_100590	A0A0A2J7J3	A0A0A2KKF0	DNA ligase.	DNA polymerase family X.	0.851
PEX2_011170	PEX2_009590	A0A0A2K8W4	A0A0A2J7J3	Mre11, DNA-binding; Belongs to the MRE11/RAD32 family.	DNA ligase.	0.775
PEX2_011170	PEX2_021140	A0A0A2K8W4	A0A0A2K031	Mre11, DNA-binding; Belongs to the MRE11/RAD32 family.	Recombination/repair protein Rad50.	0.999
PEX2_011170	PEX2_035860	A0A0A2K8W4	A0A0A2JXC9	Mre11, DNA-binding; Belongs to the MRE11/RAD32 family.	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.	0.982
PEX2_011170	PEX2_055210	A0A0A2K8W4	A0A0A2K5N9	Mre11, DNA-binding; Belongs to the MRE11/RAD32 family.	DNA ligase, ATP-dependent, N-terminal.	0.801
PEX2_011170	PEX2_068430	A0A0A2K8W4	A0A0A2JUK0	Mre11, DNA-binding; Belongs to the MRE11/RAD32 family.	DNA repair metallo-beta-lactamase.	0.842
PEX2_011170	PEX2_071530	A0A0A2K8W4	A0A0A2JR32	Mre11, DNA-binding; Belongs to the MRE11/RAD32 family.	DNA repair metallo-beta-lactamase.	0.833
PEX2_011170	PEX2_073500	A0A0A2K8W4	A0A0A2K4M6	Mre11, DNA-binding; Belongs to the MRE11/RAD32 family.	DNA helicase, ATP-dependent, Ku type.	0.985
PEX2_021140	PEX2_009590	A0A0A2K031	A0A0A2J7J3	Recombination/repair protein Rad50.	DNA ligase.	0.808
PEX2_021140	PEX2_011170	A0A0A2K031	A0A0A2K8W4	Recombination/repair protein Rad50.	Mre11, DNA-binding; Belongs to the MRE11/RAD32 family.	0.999
PEX2_021140	PEX2_035860	A0A0A2K031	A0A0A2JXC9	Recombination/repair protein Rad50.	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.	0.871
PEX2_021140	PEX2_055210	A0A0A2K031	A0A0A2K5N9	Recombination/repair protein Rad50.	DNA ligase, ATP-dependent, N-terminal.	0.820