33 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_079440	Uncharacterized protein. (495 aa)
	PEX2_098060	Peroxin-3. (560 aa)
	PEX2_006790	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (611 aa)
	PEX2_109810	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (124 aa)
	PEX2_043550	Tetratricopeptide TPR2. (214 aa)
	PEX2_049430	Uncharacterized protein. (442 aa)
	PEX2_091530	Ubiquitin-conjugating enzyme, E2; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)
	PEX2_086700	Signal recognition particle, SRP9 subunit. (166 aa)
	PEX2_025150	Uncharacterized protein. (265 aa)
	PEX2_103420	Ubiquitin-conjugating enzyme, E2. (139 aa)
	PEX2_096440	Pex19 protein. (391 aa)
	PEX2_064410	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (645 aa)
	PEX2_050240	Protein translocase SEC61 complex, gamma subunit. (70 aa)
	PEX2_076000	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid. (948 aa)
	PEX2_004440	Heat shock protein 70 family; Belongs to the heat shock protein 70 family. (673 aa)
	PEX2_039940	Heat shock protein DnaJ, N-terminal. (695 aa)
	PEX2_004430	Uncharacterized protein. (190 aa)
	PEX2_090180	Tetratricopeptide-like helical. (352 aa)
	PEX2_091870	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (409 aa)
	PEX2_072190	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (423 aa)
	PEX2_073110	SecY/SEC61-alpha family. (478 aa)
	PEX2_013060	Signal recognition particle receptor, alpha subunit, N-terminal. (647 aa)
	PEX2_085030	Signal recognition particle, SRP14 subunit. (133 aa)
	PEX2_002570	Carbohydrate-binding WSC, subgroup. (318 aa)
	PEX2_073940	Uncharacterized protein family UPF0363. (344 aa)
	PEX2_042790	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (244 aa)
	PEX2_044250	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (524 aa)
	PEX2_109840	Uncharacterized protein. (258 aa)
	PEX2_087660	Uncharacterized protein. (248 aa)
	PEX2_065370	Translocation protein Sec62, ascomycota. (395 aa)
	PEX2_108340	Sec62/63 complex, subunit Sec66. (265 aa)
	PEX2_043090	Signal recognition particle, SRP19 subunit. (293 aa)
	PEX2_019810	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (609 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_004430	PEX2_090180	A0A0A2JR14	A0A0A2JRA5	Uncharacterized protein.	Tetratricopeptide-like helical.	0.754
PEX2_004440	PEX2_039940	A0A0A2JNX9	A0A0A2JPW0	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Heat shock protein DnaJ, N-terminal.	0.912
PEX2_004440	PEX2_043090	A0A0A2JNX9	A0A0A2K5K6	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Signal recognition particle, SRP19 subunit.	0.458
PEX2_004440	PEX2_043550	A0A0A2JNX9	A0A0A2IRK8	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Tetratricopeptide TPR2.	0.474
PEX2_004440	PEX2_044250	A0A0A2JNX9	A0A0A2ILJ6	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.526
PEX2_004440	PEX2_065370	A0A0A2JNX9	A0A0A2L109	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Translocation protein Sec62, ascomycota.	0.587
PEX2_004440	PEX2_073110	A0A0A2JNX9	A0A0A2JWZ7	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	SecY/SEC61-alpha family.	0.867
PEX2_004440	PEX2_079440	A0A0A2JNX9	A0A0A2IPZ4	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.474
PEX2_004440	PEX2_090180	A0A0A2JNX9	A0A0A2JRA5	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Tetratricopeptide-like helical.	0.522
PEX2_004440	PEX2_103420	A0A0A2JNX9	A0A0A2J320	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Ubiquitin-conjugating enzyme, E2.	0.538
PEX2_004440	PEX2_108340	A0A0A2JNX9	A0A0A2K8J4	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Sec62/63 complex, subunit Sec66.	0.564
PEX2_004440	PEX2_109810	A0A0A2JNX9	A0A0A2IR44	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.567
PEX2_006790	PEX2_013060	A0A0A2IQM6	A0A0A2K352	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Signal recognition particle receptor, alpha subunit, N-terminal.	0.964
PEX2_006790	PEX2_043090	A0A0A2IQM6	A0A0A2K5K6	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Signal recognition particle, SRP19 subunit.	0.999
PEX2_006790	PEX2_044250	A0A0A2IQM6	A0A0A2ILJ6	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.999
PEX2_006790	PEX2_064410	A0A0A2IQM6	A0A0A2J9G0	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.	0.999
PEX2_006790	PEX2_073110	A0A0A2IQM6	A0A0A2JWZ7	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	SecY/SEC61-alpha family.	0.500
PEX2_006790	PEX2_085030	A0A0A2IQM6	A0A0A2K3C1	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Signal recognition particle, SRP14 subunit.	0.999
PEX2_006790	PEX2_086700	A0A0A2IQM6	A0A0A2IZP5	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Signal recognition particle, SRP9 subunit.	0.999
PEX2_006790	PEX2_109810	A0A0A2IQM6	A0A0A2IR44	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.683