23 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_058860	Nucleotide-binding, alpha-beta plait. (468 aa)
	PEX2_040910	Brix domain-containing protein. (337 aa)
	PEX2_020780	Ribosomal protein S8e/ribosomal biogenesis NSA2. (261 aa)
	PEX2_044260	Uncharacterized protein. (305 aa)
	PEX2_052330	ATPase, AAA-type, core. (831 aa)
	PEX2_025010	Protein MAK16; Belongs to the MAK16 family. (318 aa)
	PEX2_101080	CCAAT-binding factor. (1115 aa)
	PEX2_053230	Zinc finger, U1-type. (111 aa)
	PEX2_010840	ATP-dependent RNA helicase DBP10. (913 aa)
	PEX2_109980	AB hydrolase-1 domain-containing protein. (372 aa)
	PEX2_037110	Ribosomal protein L24e-like protein. (190 aa)
	PEX2_018240	Anticodon-binding. (363 aa)
	PEX2_018230	Uncharacterized protein. (363 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (819 aa)
	PEX2_026140	Uncharacterized protein. (193 aa)
	PEX2_011370	Helicase, C-terminal. (820 aa)
	PEX2_076020	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (221 aa)
	PEX2_041930	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
	PEX2_041940	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (688 aa)
	PEX2_085560	Ribosome biogenesis protein Nop16. (234 aa)
	PEX2_105310	RNA helicase. (602 aa)
	PEX2_026590	RNA helicase. (629 aa)
	PEX2_042780	Uncharacterized protein family UPF0120. (765 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_010840	PEX2_011370	A0A0A2IHW6	A0A0A2KJH7	ATP-dependent RNA helicase DBP10.	Helicase, C-terminal.	0.734
PEX2_010840	PEX2_018230	A0A0A2IHW6	A0A0A2K6C3	ATP-dependent RNA helicase DBP10.	Uncharacterized protein.	0.696
PEX2_010840	PEX2_018240	A0A0A2IHW6	A0A0A2K3V6	ATP-dependent RNA helicase DBP10.	Anticodon-binding.	0.696
PEX2_010840	PEX2_020780	A0A0A2IHW6	A0A0A2INM4	ATP-dependent RNA helicase DBP10.	Ribosomal protein S8e/ribosomal biogenesis NSA2.	0.829
PEX2_010840	PEX2_025010	A0A0A2IHW6	A0A0A2JER6	ATP-dependent RNA helicase DBP10.	Protein MAK16; Belongs to the MAK16 family.	0.800
PEX2_010840	PEX2_026140	A0A0A2IHW6	A0A0A2KHF8	ATP-dependent RNA helicase DBP10.	Uncharacterized protein.	0.684
PEX2_010840	PEX2_026590	A0A0A2IHW6	A0A0A2J6E8	ATP-dependent RNA helicase DBP10.	RNA helicase.	0.912
PEX2_010840	PEX2_037110	A0A0A2IHW6	A0A0A2JDZ0	ATP-dependent RNA helicase DBP10.	Ribosomal protein L24e-like protein.	0.834
PEX2_010840	PEX2_040910	A0A0A2IHW6	A0A0A2IRS5	ATP-dependent RNA helicase DBP10.	Brix domain-containing protein.	0.943
PEX2_010840	PEX2_041930	A0A0A2IHW6	A0A0A2KW95	ATP-dependent RNA helicase DBP10.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.827
PEX2_010840	PEX2_041940	A0A0A2IHW6	A0A0A2KYS9	ATP-dependent RNA helicase DBP10.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.870
PEX2_010840	PEX2_042780	A0A0A2IHW6	A0A0A2J0K0	ATP-dependent RNA helicase DBP10.	Uncharacterized protein family UPF0120.	0.945
PEX2_010840	PEX2_044260	A0A0A2IHW6	A0A0A2IJN6	ATP-dependent RNA helicase DBP10.	Uncharacterized protein.	0.724
PEX2_010840	PEX2_058860	A0A0A2IHW6	A0A0A2IAA3	ATP-dependent RNA helicase DBP10.	Nucleotide-binding, alpha-beta plait.	0.970
PEX2_010840	PEX2_076020	A0A0A2IHW6	A0A0A2KW03	ATP-dependent RNA helicase DBP10.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.736
PEX2_010840	PEX2_085560	A0A0A2IHW6	A0A0A2I417	ATP-dependent RNA helicase DBP10.	Ribosome biogenesis protein Nop16.	0.784
PEX2_010840	PEX2_101080	A0A0A2IHW6	A0A0A2K1S1	ATP-dependent RNA helicase DBP10.	CCAAT-binding factor.	0.870
PEX2_010840	PEX2_105310	A0A0A2IHW6	A0A0A2I3S5	ATP-dependent RNA helicase DBP10.	RNA helicase.	0.930
PEX2_010840	PEX2_109980	A0A0A2IHW6	A0A0A2JC24	ATP-dependent RNA helicase DBP10.	AB hydrolase-1 domain-containing protein.	0.739
PEX2_010840	SPB1	A0A0A2IHW6	A0A0A2K817	ATP-dependent RNA helicase DBP10.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.958