8 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_034820	Uncharacterized protein. (266 aa)
	PEX2_015090	Uncharacterized protein. (449 aa)
	PEX2_046780	Nuclear cap-binding protein subunit 2. (190 aa)
	PEX2_017250	Uncharacterized protein. (449 aa)
	PEX2_086610	mRNA decapping protein 2, Box A. (850 aa)
	PEX2_074030	MIF4-like, type 1/2/3. (822 aa)
	PEX2_015080	mRNA cap guanine-N7 methyltransferase. (540 aa)
	PEX2_073400	Dcp1-like decapping. (319 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_015080	PEX2_015090	A0A0A2ID88	A0A0A2K530	mRNA cap guanine-N7 methyltransferase.	Uncharacterized protein.	0.475
PEX2_015080	PEX2_046780	A0A0A2ID88	A0A0A2K4M9	mRNA cap guanine-N7 methyltransferase.	Nuclear cap-binding protein subunit 2.	0.759
PEX2_015080	PEX2_074030	A0A0A2ID88	A0A0A2JUZ3	mRNA cap guanine-N7 methyltransferase.	MIF4-like, type 1/2/3.	0.761
PEX2_015090	PEX2_015080	A0A0A2K530	A0A0A2ID88	Uncharacterized protein.	mRNA cap guanine-N7 methyltransferase.	0.475
PEX2_017250	PEX2_046780	A0A0A2K2A4	A0A0A2K4M9	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.556
PEX2_017250	PEX2_073400	A0A0A2K2A4	A0A0A2I0M8	Uncharacterized protein.	Dcp1-like decapping.	0.461
PEX2_034820	PEX2_073400	A0A0A2IVH5	A0A0A2I0M8	Uncharacterized protein.	Dcp1-like decapping.	0.977
PEX2_046780	PEX2_015080	A0A0A2K4M9	A0A0A2ID88	Nuclear cap-binding protein subunit 2.	mRNA cap guanine-N7 methyltransferase.	0.759
PEX2_046780	PEX2_017250	A0A0A2K4M9	A0A0A2K2A4	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.556
PEX2_046780	PEX2_073400	A0A0A2K4M9	A0A0A2I0M8	Nuclear cap-binding protein subunit 2.	Dcp1-like decapping.	0.638
PEX2_046780	PEX2_074030	A0A0A2K4M9	A0A0A2JUZ3	Nuclear cap-binding protein subunit 2.	MIF4-like, type 1/2/3.	0.999
PEX2_073400	PEX2_017250	A0A0A2I0M8	A0A0A2K2A4	Dcp1-like decapping.	Uncharacterized protein.	0.461
PEX2_073400	PEX2_034820	A0A0A2I0M8	A0A0A2IVH5	Dcp1-like decapping.	Uncharacterized protein.	0.977
PEX2_073400	PEX2_046780	A0A0A2I0M8	A0A0A2K4M9	Dcp1-like decapping.	Nuclear cap-binding protein subunit 2.	0.638
PEX2_073400	PEX2_074030	A0A0A2I0M8	A0A0A2JUZ3	Dcp1-like decapping.	MIF4-like, type 1/2/3.	0.625
PEX2_073400	PEX2_086610	A0A0A2I0M8	A0A0A2JYF2	Dcp1-like decapping.	mRNA decapping protein 2, Box A.	0.977
PEX2_074030	PEX2_015080	A0A0A2JUZ3	A0A0A2ID88	MIF4-like, type 1/2/3.	mRNA cap guanine-N7 methyltransferase.	0.761
PEX2_074030	PEX2_046780	A0A0A2JUZ3	A0A0A2K4M9	MIF4-like, type 1/2/3.	Nuclear cap-binding protein subunit 2.	0.999
PEX2_074030	PEX2_073400	A0A0A2JUZ3	A0A0A2I0M8	MIF4-like, type 1/2/3.	Dcp1-like decapping.	0.625
PEX2_086610	PEX2_073400	A0A0A2JYF2	A0A0A2I0M8	mRNA decapping protein 2, Box A.	Dcp1-like decapping.	0.977