7 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_026550	Small GTPase superfamily, Rho type. (205 aa)
	PEX2_083560	Small GTPase superfamily, Ras type. (193 aa)
	PEX2_024540	Small GTPase superfamily, Rho type. (198 aa)
	PEX2_008760	Small GTPase superfamily, Ras type. (197 aa)
	PEX2_019970	Small GTPase superfamily, Rab type. (201 aa)
	PEX2_050480	Small GTPase superfamily, Ras type. (192 aa)
	PEX2_033110	Small GTPase superfamily, Rho type. (289 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_008760	PEX2_019970	A0A0A2J7K2	A0A0A2JSB8	Small GTPase superfamily, Ras type.	Small GTPase superfamily, Rab type.	0.823
PEX2_008760	PEX2_024540	A0A0A2J7K2	A0A0A2IXI2	Small GTPase superfamily, Ras type.	Small GTPase superfamily, Rho type.	0.782
PEX2_008760	PEX2_033110	A0A0A2J7K2	A0A0A2JXL0	Small GTPase superfamily, Ras type.	Small GTPase superfamily, Rho type.	0.817
PEX2_008760	PEX2_050480	A0A0A2J7K2	A0A0A2JTK1	Small GTPase superfamily, Ras type.	Small GTPase superfamily, Ras type.	0.462
PEX2_008760	PEX2_083560	A0A0A2J7K2	A0A0A2IKI9	Small GTPase superfamily, Ras type.	Small GTPase superfamily, Ras type.	0.823
PEX2_019970	PEX2_008760	A0A0A2JSB8	A0A0A2J7K2	Small GTPase superfamily, Rab type.	Small GTPase superfamily, Ras type.	0.823
PEX2_019970	PEX2_024540	A0A0A2JSB8	A0A0A2IXI2	Small GTPase superfamily, Rab type.	Small GTPase superfamily, Rho type.	0.821
PEX2_019970	PEX2_026550	A0A0A2JSB8	A0A0A2J4L0	Small GTPase superfamily, Rab type.	Small GTPase superfamily, Rho type.	0.815
PEX2_019970	PEX2_033110	A0A0A2JSB8	A0A0A2JXL0	Small GTPase superfamily, Rab type.	Small GTPase superfamily, Rho type.	0.823
PEX2_019970	PEX2_050480	A0A0A2JSB8	A0A0A2JTK1	Small GTPase superfamily, Rab type.	Small GTPase superfamily, Ras type.	0.823
PEX2_019970	PEX2_083560	A0A0A2JSB8	A0A0A2IKI9	Small GTPase superfamily, Rab type.	Small GTPase superfamily, Ras type.	0.442
PEX2_024540	PEX2_008760	A0A0A2IXI2	A0A0A2J7K2	Small GTPase superfamily, Rho type.	Small GTPase superfamily, Ras type.	0.782
PEX2_024540	PEX2_019970	A0A0A2IXI2	A0A0A2JSB8	Small GTPase superfamily, Rho type.	Small GTPase superfamily, Rab type.	0.821
PEX2_024540	PEX2_026550	A0A0A2IXI2	A0A0A2J4L0	Small GTPase superfamily, Rho type.	Small GTPase superfamily, Rho type.	0.789
PEX2_024540	PEX2_033110	A0A0A2IXI2	A0A0A2JXL0	Small GTPase superfamily, Rho type.	Small GTPase superfamily, Rho type.	0.883
PEX2_024540	PEX2_050480	A0A0A2IXI2	A0A0A2JTK1	Small GTPase superfamily, Rho type.	Small GTPase superfamily, Ras type.	0.734
PEX2_024540	PEX2_083560	A0A0A2IXI2	A0A0A2IKI9	Small GTPase superfamily, Rho type.	Small GTPase superfamily, Ras type.	0.821
PEX2_026550	PEX2_019970	A0A0A2J4L0	A0A0A2JSB8	Small GTPase superfamily, Rho type.	Small GTPase superfamily, Rab type.	0.815
PEX2_026550	PEX2_024540	A0A0A2J4L0	A0A0A2IXI2	Small GTPase superfamily, Rho type.	Small GTPase superfamily, Rho type.	0.789
PEX2_026550	PEX2_033110	A0A0A2J4L0	A0A0A2JXL0	Small GTPase superfamily, Rho type.	Small GTPase superfamily, Rho type.	0.846