29 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_104650	Uncharacterized protein. (483 aa)
	PEX2_011350	ANK_REP_REGION domain-containing protein. (855 aa)
	PEX2_060830	Protein kinase domain-containing protein. (336 aa)
	PEX2_095830	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (493 aa)
	PEX2_087150	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1083 aa)
	PEX2_019440	Protein kinase domain-containing protein. (552 aa)
	PEX2_075230	ANK_REP_REGION domain-containing protein. (412 aa)
	PEX2_005750	Uncharacterized protein. (515 aa)
	PEX2_077290	Uncharacterized protein. (701 aa)
	PEX2_049570	Protein kinase domain-containing protein. (330 aa)
	PEX2_060960	Serine/threonine-protein phosphatase. (541 aa)
	PEX2_096350	Protein kinase domain-containing protein. (839 aa)
	PEX2_026000	Calcium-binding EF-hand. (196 aa)
	PEX2_059080	BZIP domain-containing protein. (250 aa)
	PEX2_057370	Uncharacterized protein. (370 aa)
	PEX2_058150	Armadillo-like helical. (1342 aa)
	PEX2_048890	Uncharacterized protein. (73 aa)
	PEX2_007310	Uncharacterized protein. (830 aa)
	PEX2_009450	Ribosomal protein S27a. (193 aa)
	PEX2_105980	Uncharacterized protein. (123 aa)
	PEX2_006300	Zinc finger, RING-type. (452 aa)
	PEX2_014370	ANK_REP_REGION domain-containing protein. (752 aa)
	PEX2_101930	DUF5353 domain-containing protein. (164 aa)
	PEX2_098380	Serine/threonine-protein phosphatase. (561 aa)
	PEX2_107040	Aminoglycoside phosphotransferase. (271 aa)
	PEX2_074310	Uncharacterized protein. (577 aa)
	PEX2_042620	Aminoglycoside phosphotransferase. (258 aa)
	PEX2_005030	Protein kinase domain-containing protein. (622 aa)
	PEX2_071960	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation. (102 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_005030	PEX2_019440	A0A0A2I8P5	A0A0A2JZ71	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.879
PEX2_005030	PEX2_058150	A0A0A2I8P5	A0A0A2JCI0	Protein kinase domain-containing protein.	Armadillo-like helical.	0.809
PEX2_005030	PEX2_060960	A0A0A2I8P5	A0A0A2JFL4	Protein kinase domain-containing protein.	Serine/threonine-protein phosphatase.	0.637
PEX2_005030	PEX2_087150	A0A0A2I8P5	A0A0A2K0U9	Protein kinase domain-containing protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.765
PEX2_005030	PEX2_095830	A0A0A2I8P5	A0A0A2K7I0	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.587
PEX2_005030	PEX2_098380	A0A0A2I8P5	A0A0A2IND7	Protein kinase domain-containing protein.	Serine/threonine-protein phosphatase.	0.637
PEX2_005750	PEX2_006300	A0A0A2JMH9	A0A0A2IZE5	Uncharacterized protein.	Zinc finger, RING-type.	0.596
PEX2_005750	PEX2_058150	A0A0A2JMH9	A0A0A2JCI0	Uncharacterized protein.	Armadillo-like helical.	0.471
PEX2_005750	PEX2_087150	A0A0A2JMH9	A0A0A2K0U9	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.613
PEX2_006300	PEX2_005750	A0A0A2IZE5	A0A0A2JMH9	Zinc finger, RING-type.	Uncharacterized protein.	0.596
PEX2_006300	PEX2_009450	A0A0A2IZE5	A0A0A2J9P5	Zinc finger, RING-type.	Ribosomal protein S27a.	0.965
PEX2_006300	PEX2_042620	A0A0A2IZE5	A0A0A2IC14	Zinc finger, RING-type.	Aminoglycoside phosphotransferase.	0.596
PEX2_006300	PEX2_048890	A0A0A2IZE5	A0A0A2JCH3	Zinc finger, RING-type.	Uncharacterized protein.	0.596
PEX2_006300	PEX2_049570	A0A0A2IZE5	A0A0A2JK04	Zinc finger, RING-type.	Protein kinase domain-containing protein.	0.596
PEX2_006300	PEX2_058150	A0A0A2IZE5	A0A0A2JCI0	Zinc finger, RING-type.	Armadillo-like helical.	0.751
PEX2_006300	PEX2_059080	A0A0A2IZE5	A0A0A2JD24	Zinc finger, RING-type.	BZIP domain-containing protein.	0.965
PEX2_006300	PEX2_060830	A0A0A2IZE5	A0A0A2KA03	Zinc finger, RING-type.	Protein kinase domain-containing protein.	0.596
PEX2_006300	PEX2_071960	A0A0A2IZE5	A0A0A2I6Y6	Zinc finger, RING-type.	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation.	0.596
PEX2_006300	PEX2_074310	A0A0A2IZE5	A0A0A2IEE1	Zinc finger, RING-type.	Uncharacterized protein.	0.596
PEX2_006300	PEX2_087150	A0A0A2IZE5	A0A0A2K0U9	Zinc finger, RING-type.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.761