51 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_095340	Non-specific serine/threonine protein kinase. (641 aa)
	PEX2_099430	Phosphatidic acid phosphatase type 2/haloperoxidase. (437 aa)
	PEX2_060850	Fungal G-protein, alpha subunit. (353 aa)
	PEX2_021600	AGC-kinase, C-terminal; Belongs to the protein kinase superfamily. (391 aa)
	PEX2_011910	Ketopantoate reductase ApbA/PanE, C-terminal. (305 aa)
	PEX2_013940	Complex 1 LYR protein. (130 aa)
	PEX2_102450	Calcium/calmodulin-dependent/calcium-dependent protein kinase. (818 aa)
	PEX2_099670	Lysophospholipase. (621 aa)
	PEX2_086070	Phosphoinositide phospholipase C. (645 aa)
	PEX2_087150	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1083 aa)
	PEX2_034210	AB hydrolase-1 domain-containing protein. (419 aa)
	PEX2_054460	Peptidase S12, Pab87-related, C-terminal. (511 aa)
	PEX2_053440	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (354 aa)
	PEX2_074420	Phosphatidic acid phosphatase type 2/haloperoxidase. (389 aa)
	PEX2_047100	Uncharacterized protein. (401 aa)
	PEX2_078900	Chitin synthase III catalytic subunit. (328 aa)
	PEX2_001500	Winged helix-turn-helix transcription repressor DNA-binding. (640 aa)
	PEX2_004960	Ras guanine nucleotide exchange factor. (1234 aa)
	PEX2_080510	Uncharacterized protein. (1190 aa)
	PEX2_090000	Non-specific serine/threonine protein kinase. (892 aa)
	PEX2_096350	Protein kinase domain-containing protein. (839 aa)
	PEX2_061150	Phosphoinositide phospholipase C. (1157 aa)
	PEX2_059530	NADH dehydrogenase [ubiquinone] (Complex I), 21kDa subunit, fungi. (197 aa)
	PEX2_082930	Alpha/beta hydrolase fold-1. (264 aa)
	PEX2_057370	Uncharacterized protein. (370 aa)
	PEX2_028480	cAMP-dependent protein kinase regulatory subunit. (414 aa)
	PEX2_028440	AGC-kinase, C-terminal. (577 aa)
	PEX2_104950	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (422 aa)
	PEX2_050280	Uncharacterized protein. (156 aa)
	PEX2_044790	Uncharacterized protein. (160 aa)
	PEX2_021060	Hydrolase_4 domain-containing protein. (339 aa)
	PEX2_061670	Fungal G-protein, alpha subunit. (356 aa)
	PEX2_024700	Calcium/calmodulin-dependent/calcium-dependent protein kinase. (1173 aa)
	PEX2_034920	Uncharacterized protein. (161 aa)
	PEX2_006530	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (346 aa)
	PEX2_075880	Uncharacterized protein. (1890 aa)
	PEX2_039310	Uncharacterized protein. (317 aa)
	PEX2_079910	Uncharacterized protein. (101 aa)
	PEX2_026910	AB hydrolase-1 domain-containing protein. (401 aa)
	PEX2_058420	Guanine-nucleotide dissociation stimulator CDC25. (1168 aa)
	PEX2_110590	Phosphodiesterase. (987 aa)
	PEX2_065130	Uncharacterized protein. (178 aa)
	PEX2_028740	AB hydrolase-1 domain-containing protein. (553 aa)
	PEX2_035690	Fungal G-protein, alpha subunit. (359 aa)
	PEX2_018650	Calcium-binding EF-hand. (1297 aa)
	PEX2_089870	Ribosome biogenesis protein SSF1/SSF2. (446 aa)
	PEX2_069220	Chromatin associated protein KTI12. (418 aa)
	PEX2_009510	Alpha/beta hydrolase fold-1. (279 aa)
	PEX2_072650	Winged helix-turn-helix transcription repressor DNA-binding. (1214 aa)
	PEX2_032070	Chitin synthase III catalytic subunit. (283 aa)
	PEX2_058960	Guanine-nucleotide dissociation stimulator CDC25. (463 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_001500	PEX2_028480	A0A0A2JQV1	A0A0A2J6I3	Winged helix-turn-helix transcription repressor DNA-binding.	cAMP-dependent protein kinase regulatory subunit.	0.747
PEX2_001500	PEX2_032070	A0A0A2JQV1	A0A0A2HZ58	Winged helix-turn-helix transcription repressor DNA-binding.	Chitin synthase III catalytic subunit.	0.934
PEX2_001500	PEX2_034920	A0A0A2JQV1	A0A0A2IQR1	Winged helix-turn-helix transcription repressor DNA-binding.	Uncharacterized protein.	0.416
PEX2_001500	PEX2_035690	A0A0A2JQV1	A0A0A2KZF9	Winged helix-turn-helix transcription repressor DNA-binding.	Fungal G-protein, alpha subunit.	0.950
PEX2_001500	PEX2_044790	A0A0A2JQV1	A0A0A2IY14	Winged helix-turn-helix transcription repressor DNA-binding.	Uncharacterized protein.	0.416
PEX2_001500	PEX2_047100	A0A0A2JQV1	A0A0A2JTY9	Winged helix-turn-helix transcription repressor DNA-binding.	Uncharacterized protein.	0.621
PEX2_001500	PEX2_053440	A0A0A2JQV1	A0A0A2JY81	Winged helix-turn-helix transcription repressor DNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.739
PEX2_001500	PEX2_060850	A0A0A2JQV1	A0A0A2KA44	Winged helix-turn-helix transcription repressor DNA-binding.	Fungal G-protein, alpha subunit.	0.974
PEX2_001500	PEX2_061670	A0A0A2JQV1	A0A0A2IU64	Winged helix-turn-helix transcription repressor DNA-binding.	Fungal G-protein, alpha subunit.	0.950
PEX2_001500	PEX2_078900	A0A0A2JQV1	A0A0A2JSQ3	Winged helix-turn-helix transcription repressor DNA-binding.	Chitin synthase III catalytic subunit.	0.934
PEX2_001500	PEX2_104950	A0A0A2JQV1	A0A0A2J3A4	Winged helix-turn-helix transcription repressor DNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.416
PEX2_001500	PEX2_110590	A0A0A2JQV1	A0A0A2KUJ9	Winged helix-turn-helix transcription repressor DNA-binding.	Phosphodiesterase.	0.469
PEX2_004960	PEX2_006530	A0A0A2JQN6	A0A0A2INT5	Ras guanine nucleotide exchange factor.	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	0.606
PEX2_004960	PEX2_011910	A0A0A2JQN6	A0A0A2K6B5	Ras guanine nucleotide exchange factor.	Ketopantoate reductase ApbA/PanE, C-terminal.	0.606
PEX2_004960	PEX2_021600	A0A0A2JQN6	A0A0A2K7A3	Ras guanine nucleotide exchange factor.	AGC-kinase, C-terminal; Belongs to the protein kinase superfamily.	0.791
PEX2_004960	PEX2_035690	A0A0A2JQN6	A0A0A2KZF9	Ras guanine nucleotide exchange factor.	Fungal G-protein, alpha subunit.	0.415
PEX2_004960	PEX2_050280	A0A0A2JQN6	A0A0A2IZP2	Ras guanine nucleotide exchange factor.	Uncharacterized protein.	0.531
PEX2_004960	PEX2_057370	A0A0A2JQN6	A0A0A2JCK9	Ras guanine nucleotide exchange factor.	Uncharacterized protein.	0.472
PEX2_004960	PEX2_060850	A0A0A2JQN6	A0A0A2KA44	Ras guanine nucleotide exchange factor.	Fungal G-protein, alpha subunit.	0.415
PEX2_004960	PEX2_061670	A0A0A2JQN6	A0A0A2IU64	Ras guanine nucleotide exchange factor.	Fungal G-protein, alpha subunit.	0.415