STRINGSTRING
PEX2_046780 PEX2_046780 PEX2_005540 PEX2_005540 PEX2_046590 PEX2_046590 PEX2_088170 PEX2_088170 PEX2_032730 PEX2_032730 PEX2_023540 PEX2_023540 PEX2_103900 PEX2_103900 PEX2_005630 PEX2_005630 PEX2_103510 PEX2_103510 PEX2_035620 PEX2_035620 PEX2_066550 PEX2_066550 PEX2_093480 PEX2_093480 PEX2_033900 PEX2_033900 PEX2_009270 PEX2_009270 PEX2_019430 PEX2_019430 PEX2_088740 PEX2_088740 PEX2_019640 PEX2_019640 PEX2_069980 PEX2_069980 PEX2_096650 PEX2_096650 PEX2_038860 PEX2_038860 PEX2_075630 PEX2_075630 PEX2_007180 PEX2_007180 PEX2_012230 PEX2_012230 PEX2_102570 PEX2_102570 PEX2_012650 PEX2_012650 PEX2_051590 PEX2_051590 PEX2_046370 PEX2_046370 PEX2_046730 PEX2_046730 PEX2_086270 PEX2_086270 PEX2_075550 PEX2_075550 PEX2_028450 PEX2_028450 PEX2_016890 PEX2_016890 PEX2_018910 PEX2_018910 PEX2_027080 PEX2_027080 PEX2_088750 PEX2_088750 PEX2_020830 PEX2_020830 PEX2_098130 PEX2_098130 PEX2_098160 PEX2_098160 PEX2_001490 PEX2_001490 PEX2_060160 PEX2_060160 PEX2_017990 PEX2_017990 PEX2_031980 PEX2_031980 PEX2_027890 PEX2_027890 PEX2_103390 PEX2_103390 PEX2_028400 PEX2_028400 PEX2_028550 PEX2_028550 PEX2_038850 PEX2_038850 PEX2_062890 PEX2_062890 PEX2_065350 PEX2_065350 PEX2_110520 PEX2_110520 PEX2_005710 PEX2_005710 PEX2_087740 PEX2_087740 PEX2_035240 PEX2_035240 PEX2_003980 PEX2_003980 PEX2_098150 PEX2_098150 PEX2_038130 PEX2_038130 PEX2_040100 PEX2_040100 PEX2_094120 PEX2_094120 PEX2_074030 PEX2_074030 PEX2_087860 PEX2_087860 PEX2_000550 PEX2_000550 PEX2_067980 PEX2_067980 PEX2_081010 PEX2_081010 PEX2_085190 PEX2_085190
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PEX2_046780Nuclear cap-binding protein subunit 2. (190 aa)
PEX2_005540Transcription factor IIA, alpha/beta subunit. (372 aa)
PEX2_046590Acyltransferase 3. (481 aa)
PEX2_088170DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
PEX2_032730Transcription initiation factor IIA, gamma subunit. (496 aa)
PEX2_023540DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
PEX2_103900Uncharacterized protein. (642 aa)
PEX2_005630DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1738 aa)
PEX2_103510RNA polymerase archaeal subunit P/eukaryotic subunit RPC10. (78 aa)
PEX2_035620Transcription factor TFIIB. (350 aa)
PEX2_066550Transcription initiation factor IIF, beta subunit. (363 aa)
PEX2_093480DNA-directed RNA polymerase, dimerization. (335 aa)
PEX2_033900Ssl1 domain-containing protein. (232 aa)
PEX2_009270RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (816 aa)
PEX2_019430Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1411 aa)
PEX2_088740Uncharacterized protein. (640 aa)
PEX2_019640Histone-fold. (616 aa)
PEX2_069980Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (120 aa)
PEX2_096650Leo1-like protein. (434 aa)
PEX2_038860Nucleic acid-binding, OB-fold. (169 aa)
PEX2_075630Histone-fold. (389 aa)
PEX2_007180Cdk-activating kinase assembly factor MAT1, centre. (352 aa)
PEX2_012230Helicase-like, DEXD box c2 type. (796 aa)
PEX2_102570Tetratricopeptide TPR2. (1195 aa)
PEX2_012650DNA-directed RNA polymerase, RPB5 subunit. (234 aa)
PEX2_051590Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (692 aa)
PEX2_046370Transcription factor TFIIE, alpha subunit. (450 aa)
PEX2_046730DNA-directed RNA polymerase, M/15kDa subunit. (136 aa)
PEX2_086270Protein kinase domain-containing protein. (533 aa)
PEX2_075550Uncharacterized protein. (294 aa)
PEX2_028450Cyclin C/H/T/L; Belongs to the cyclin family. (500 aa)
PEX2_016890TFIID subunit, WD40-associated region. (751 aa)
PEX2_018910RNA polymerase II-associated, Paf1. (486 aa)
PEX2_027080Acyltransferase 3. (457 aa)
PEX2_088750DNA-directed RNA polymerase, subunit N/Rpb10. (74 aa)
PEX2_020830RNA polymerase II, Rpb4, core. (148 aa)
PEX2_098130TATA box binding protein associated factor (TAF). (442 aa)
PEX2_098160Acyltransferase 3. (473 aa)
PEX2_001490RNA polymerase II accessory factor, Cdc73. (474 aa)
PEX2_060160Transcription factor IIS, N-terminal. (442 aa)
PEX2_017990Uncharacterized protein. (132 aa)
PEX2_031980Glutathione S-transferase/chloride channel, C-terminal; Belongs to the GST superfamily. (660 aa)
PEX2_027890Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (293 aa)
PEX2_103390Tetratricopeptide-like helical. (395 aa)
PEX2_028400TATA-box binding protein. (262 aa)
PEX2_028550DUF4211 domain-containing protein. (654 aa)
PEX2_038850Uncharacterized protein. (541 aa)
PEX2_062890Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1025 aa)
PEX2_065350Uncharacterized protein. (732 aa)
PEX2_110520RNA polymerase, subunit omega/K/RPABC2. (153 aa)
PEX2_005710Histone-fold. (293 aa)
PEX2_087740Transcription factor Tfb4. (379 aa)
PEX2_035240RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (479 aa)
PEX2_003980DUF3591 domain-containing protein. (1116 aa)
PEX2_098150Histone-fold. (397 aa)
PEX2_038130Uncharacterized protein. (1243 aa)
PEX2_040100Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (404 aa)
PEX2_094120Uncharacterized protein. (1021 aa)
PEX2_074030MIF4-like, type 1/2/3. (822 aa)
PEX2_087860Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (239 aa)
PEX2_000550Helicase, C-terminal. (822 aa)
PEX2_067980TAFII55 protein, conserved region. (474 aa)
PEX2_081010FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (577 aa)
PEX2_085190Plus-3. (611 aa)
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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