29 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_012090	Uncharacterized protein. (413 aa)
	PEX2_012650	DNA-directed RNA polymerase, RPB5 subunit. (234 aa)
	PEX2_012230	Helicase-like, DEXD box c2 type. (796 aa)
	PEX2_033900	Ssl1 domain-containing protein. (232 aa)
	PEX2_088740	Uncharacterized protein. (640 aa)
	PEX2_007180	Cdk-activating kinase assembly factor MAT1, centre. (352 aa)
	PEX2_103900	Uncharacterized protein. (642 aa)
	PEX2_103510	RNA polymerase archaeal subunit P/eukaryotic subunit RPC10. (78 aa)
	PEX2_077930	Uncharacterized protein. (695 aa)
	PEX2_003180	DNA-directed RNA polymerase, dimerization. (374 aa)
	PEX2_088170	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	PEX2_000550	Helicase, C-terminal. (822 aa)
	PEX2_040100	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (404 aa)
	PEX2_023870	RNA polymerase Rpb7, N-terminal. (385 aa)
	PEX2_035240	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (479 aa)
	PEX2_087740	Transcription factor Tfb4. (379 aa)
	PEX2_110520	RNA polymerase, subunit omega/K/RPABC2. (153 aa)
	PEX2_028400	TATA-box binding protein. (262 aa)
	PEX2_082500	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1249 aa)
	PEX2_105190	Zinc finger, PHD-type. (1519 aa)
	PEX2_006720	Ubiquitin supergroup. (729 aa)
	PEX2_037470	Histone H2B; Belongs to the histone H2B family. (141 aa)
	PEX2_104610	SprT-like domain-containing protein. (596 aa)
	PEX2_107830	Uncharacterized protein. (305 aa)
	PEX2_044590	Uncharacterized protein. (567 aa)
	PEX2_083680	Uncharacterized protein. (474 aa)
	PEX2_088750	DNA-directed RNA polymerase, subunit N/Rpb10. (74 aa)
	PEX2_018730	RNA polymerase I specific transcription initiation factor RRN3. (691 aa)
	PEX2_012190	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1671 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_000550	PEX2_003180	A0A0A2JYV8	A0A0A2K998	Helicase, C-terminal.	DNA-directed RNA polymerase, dimerization.	0.962
PEX2_000550	PEX2_006720	A0A0A2JYV8	A0A0A2J9W5	Helicase, C-terminal.	Ubiquitin supergroup.	0.708
PEX2_000550	PEX2_007180	A0A0A2JYV8	A0A0A2I749	Helicase, C-terminal.	Cdk-activating kinase assembly factor MAT1, centre.	0.996
PEX2_000550	PEX2_012190	A0A0A2JYV8	A0A0A2I945	Helicase, C-terminal.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.798
PEX2_000550	PEX2_012230	A0A0A2JYV8	A0A0A2I779	Helicase, C-terminal.	Helicase-like, DEXD box c2 type.	0.999
PEX2_000550	PEX2_012650	A0A0A2JYV8	A0A0A2I7F3	Helicase, C-terminal.	DNA-directed RNA polymerase, RPB5 subunit.	0.984
PEX2_000550	PEX2_028400	A0A0A2JYV8	A0A0A2JD85	Helicase, C-terminal.	TATA-box binding protein.	0.981
PEX2_000550	PEX2_033900	A0A0A2JYV8	A0A0A2I0G9	Helicase, C-terminal.	Ssl1 domain-containing protein.	0.999
PEX2_000550	PEX2_035240	A0A0A2JYV8	A0A0A2JLB3	Helicase, C-terminal.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
PEX2_000550	PEX2_037470	A0A0A2JYV8	A0A0A2J743	Helicase, C-terminal.	Histone H2B; Belongs to the histone H2B family.	0.589
PEX2_000550	PEX2_040100	A0A0A2JYV8	A0A0A2JR15	Helicase, C-terminal.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.983
PEX2_000550	PEX2_082500	A0A0A2JYV8	A0A0A2JC28	Helicase, C-terminal.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.940
PEX2_000550	PEX2_087740	A0A0A2JYV8	A0A0A2JKJ6	Helicase, C-terminal.	Transcription factor Tfb4.	0.999
PEX2_000550	PEX2_088170	A0A0A2JYV8	A0A0A2K8D7	Helicase, C-terminal.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.970
PEX2_000550	PEX2_088740	A0A0A2JYV8	A0A0A2I2H4	Helicase, C-terminal.	Uncharacterized protein.	0.943
PEX2_000550	PEX2_088750	A0A0A2JYV8	A0A0A2IHT3	Helicase, C-terminal.	DNA-directed RNA polymerase, subunit N/Rpb10.	0.943
PEX2_000550	PEX2_103510	A0A0A2JYV8	A0A0A2KXR6	Helicase, C-terminal.	RNA polymerase archaeal subunit P/eukaryotic subunit RPC10.	0.970
PEX2_000550	PEX2_103900	A0A0A2JYV8	A0A0A2L3A3	Helicase, C-terminal.	Uncharacterized protein.	0.999
PEX2_000550	PEX2_105190	A0A0A2JYV8	A0A0A2JC21	Helicase, C-terminal.	Zinc finger, PHD-type.	0.467
PEX2_000550	PEX2_110520	A0A0A2JYV8	A0A0A2JJD5	Helicase, C-terminal.	RNA polymerase, subunit omega/K/RPABC2.	0.969