18 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_092970	Helicase, C-terminal. (1120 aa)
	PEX2_009450	Ribosomal protein S27a. (193 aa)
	PEX2_110690	Zinc finger, RING-type. (2083 aa)
	PEX2_059080	BZIP domain-containing protein. (250 aa)
	PEX2_003810	Helicase, C-terminal. (1260 aa)
	PEX2_053790	Helicase, C-terminal. (1182 aa)
	PEX2_101530	WW/Rsp5/WWP. (783 aa)
	PEX2_085190	Plus-3. (611 aa)
	PEX2_067400	Helicase, C-terminal. (489 aa)
	PEX2_015410	Zinc finger, RING-type. (1220 aa)
	PEX2_042450	Helicase, C-terminal. (950 aa)
	PEX2_102570	Tetratricopeptide TPR2. (1195 aa)
	PEX2_059150	Helicase, C-terminal. (424 aa)
	PEX2_003440	Uncharacterized protein. (542 aa)
	PEX2_110380	Uncharacterized protein. (321 aa)
	PEX2_002040	Zinc finger, RING-type. (948 aa)
	PEX2_051120	Zinc finger, RING-type. (1689 aa)
	PEX2_037470	Histone H2B; Belongs to the histone H2B family. (141 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_002040	PEX2_009450	A0A0A2IR50	A0A0A2J9P5	Zinc finger, RING-type.	Ribosomal protein S27a.	0.529
PEX2_002040	PEX2_037470	A0A0A2IR50	A0A0A2J743	Zinc finger, RING-type.	Histone H2B; Belongs to the histone H2B family.	0.654
PEX2_002040	PEX2_051120	A0A0A2IR50	A0A0A2J258	Zinc finger, RING-type.	Zinc finger, RING-type.	0.446
PEX2_002040	PEX2_059080	A0A0A2IR50	A0A0A2JD24	Zinc finger, RING-type.	BZIP domain-containing protein.	0.529
PEX2_003440	PEX2_009450	A0A0A2IIF7	A0A0A2J9P5	Uncharacterized protein.	Ribosomal protein S27a.	0.529
PEX2_003440	PEX2_037470	A0A0A2IIF7	A0A0A2J743	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.654
PEX2_003440	PEX2_059080	A0A0A2IIF7	A0A0A2JD24	Uncharacterized protein.	BZIP domain-containing protein.	0.529
PEX2_003810	PEX2_009450	A0A0A2JNM4	A0A0A2J9P5	Helicase, C-terminal.	Ribosomal protein S27a.	0.529
PEX2_003810	PEX2_037470	A0A0A2JNM4	A0A0A2J743	Helicase, C-terminal.	Histone H2B; Belongs to the histone H2B family.	0.654
PEX2_003810	PEX2_051120	A0A0A2JNM4	A0A0A2J258	Helicase, C-terminal.	Zinc finger, RING-type.	0.464
PEX2_003810	PEX2_059080	A0A0A2JNM4	A0A0A2JD24	Helicase, C-terminal.	BZIP domain-containing protein.	0.529
PEX2_009450	PEX2_002040	A0A0A2J9P5	A0A0A2IR50	Ribosomal protein S27a.	Zinc finger, RING-type.	0.529
PEX2_009450	PEX2_003440	A0A0A2J9P5	A0A0A2IIF7	Ribosomal protein S27a.	Uncharacterized protein.	0.529
PEX2_009450	PEX2_003810	A0A0A2J9P5	A0A0A2JNM4	Ribosomal protein S27a.	Helicase, C-terminal.	0.529
PEX2_009450	PEX2_015410	A0A0A2J9P5	A0A0A2K2A1	Ribosomal protein S27a.	Zinc finger, RING-type.	0.529
PEX2_009450	PEX2_037470	A0A0A2J9P5	A0A0A2J743	Ribosomal protein S27a.	Histone H2B; Belongs to the histone H2B family.	0.873
PEX2_009450	PEX2_042450	A0A0A2J9P5	A0A0A2KFC0	Ribosomal protein S27a.	Helicase, C-terminal.	0.529
PEX2_009450	PEX2_051120	A0A0A2J9P5	A0A0A2J258	Ribosomal protein S27a.	Zinc finger, RING-type.	0.744
PEX2_009450	PEX2_053790	A0A0A2J9P5	A0A0A2JYA9	Ribosomal protein S27a.	Helicase, C-terminal.	0.529
PEX2_009450	PEX2_059150	A0A0A2J9P5	A0A0A2II59	Ribosomal protein S27a.	Helicase, C-terminal.	0.529