16 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_059080	BZIP domain-containing protein. (250 aa)
	PEX2_052510	Ubiquitin fusion degradation protein UFD1. (766 aa)
	PEX2_053780	Uncharacterized protein. (62 aa)
	PEX2_059110	Dipeptidyl-peptidase 3. (1145 aa)
	PEX2_009450	Ribosomal protein S27a. (193 aa)
	PEX2_053770	Uncharacterized protein. (88 aa)
	PEX2_016830	Putative NPL4, zinc-binding. (654 aa)
	PEX2_052330	ATPase, AAA-type, core. (831 aa)
	PEX2_015510	UBX domain-containing protein. (508 aa)
	PEX2_007630	ATPase, AAA-type, core. (621 aa)
	PEX2_041880	ATPase, AAA-type, core; Belongs to the AAA ATPase family. (820 aa)
	PEX2_010790	ATPase, AAA-type, core. (966 aa)
	PEX2_102670	Zinc finger, RING/FYVE/PHD-type. (100 aa)
	PEX2_101960	ATPase, AAA-type, core. (905 aa)
	PEX2_002120	ATPase, AAA-type, core. (890 aa)
	PEX2_018460	Ubiquitin fusion degradation protein UFD1. (395 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_002120	PEX2_009450	A0A0A2JRJ0	A0A0A2J9P5	ATPase, AAA-type, core.	Ribosomal protein S27a.	0.804
PEX2_002120	PEX2_015510	A0A0A2JRJ0	A0A0A2K3L9	ATPase, AAA-type, core.	UBX domain-containing protein.	0.887
PEX2_002120	PEX2_016830	A0A0A2JRJ0	A0A0A2I7Z1	ATPase, AAA-type, core.	Putative NPL4, zinc-binding.	0.897
PEX2_002120	PEX2_018460	A0A0A2JRJ0	A0A0A2JGE4	ATPase, AAA-type, core.	Ubiquitin fusion degradation protein UFD1.	0.845
PEX2_002120	PEX2_052510	A0A0A2JRJ0	A0A0A2K6E0	ATPase, AAA-type, core.	Ubiquitin fusion degradation protein UFD1.	0.845
PEX2_002120	PEX2_053770	A0A0A2JRJ0	A0A0A2IY72	ATPase, AAA-type, core.	Uncharacterized protein.	0.505
PEX2_002120	PEX2_053780	A0A0A2JRJ0	A0A0A2K606	ATPase, AAA-type, core.	Uncharacterized protein.	0.505
PEX2_002120	PEX2_059080	A0A0A2JRJ0	A0A0A2JD24	ATPase, AAA-type, core.	BZIP domain-containing protein.	0.804
PEX2_002120	PEX2_102670	A0A0A2JRJ0	A0A0A2K2T5	ATPase, AAA-type, core.	Zinc finger, RING/FYVE/PHD-type.	0.679
PEX2_007630	PEX2_009450	A0A0A2KG54	A0A0A2J9P5	ATPase, AAA-type, core.	Ribosomal protein S27a.	0.804
PEX2_007630	PEX2_015510	A0A0A2KG54	A0A0A2K3L9	ATPase, AAA-type, core.	UBX domain-containing protein.	0.887
PEX2_007630	PEX2_016830	A0A0A2KG54	A0A0A2I7Z1	ATPase, AAA-type, core.	Putative NPL4, zinc-binding.	0.897
PEX2_007630	PEX2_018460	A0A0A2KG54	A0A0A2JGE4	ATPase, AAA-type, core.	Ubiquitin fusion degradation protein UFD1.	0.845
PEX2_007630	PEX2_052510	A0A0A2KG54	A0A0A2K6E0	ATPase, AAA-type, core.	Ubiquitin fusion degradation protein UFD1.	0.845
PEX2_007630	PEX2_053770	A0A0A2KG54	A0A0A2IY72	ATPase, AAA-type, core.	Uncharacterized protein.	0.505
PEX2_007630	PEX2_053780	A0A0A2KG54	A0A0A2K606	ATPase, AAA-type, core.	Uncharacterized protein.	0.505
PEX2_007630	PEX2_059080	A0A0A2KG54	A0A0A2JD24	ATPase, AAA-type, core.	BZIP domain-containing protein.	0.804
PEX2_007630	PEX2_102670	A0A0A2KG54	A0A0A2K2T5	ATPase, AAA-type, core.	Zinc finger, RING/FYVE/PHD-type.	0.679
PEX2_009450	PEX2_002120	A0A0A2J9P5	A0A0A2JRJ0	Ribosomal protein S27a.	ATPase, AAA-type, core.	0.804
PEX2_009450	PEX2_007630	A0A0A2J9P5	A0A0A2KG54	Ribosomal protein S27a.	ATPase, AAA-type, core.	0.804