STRINGSTRING
CDG12397.1 CDG12397.1 CDG12399.1 CDG12399.1 CDG12400.1 CDG12400.1 CDG12401.1 CDG12401.1 CDG12402.1 CDG12402.1 agaF agaF agaE agaE agaW agaW agaV agaV agaZ agaZ agaR agaR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CDG12397.1Putative oxidoreductase. (427 aa)
CDG12399.1DeoR-family trancriptional regulator. (256 aa)
CDG12400.1Putative tagatose-6-phosphateketose/aldoseisomerase. (388 aa)
CDG12401.1D-tagatose 1,6-bisphosphate aldolase 2,catalytic subunit. (284 aa)
CDG12402.1Putative exported protein. (103 aa)
agaFPutative N-acetylgalactosamine-specific PTS system, IIA component. (144 aa)
agaEPutative N-acetylgalactosamine-specific PTS system, IID component. (297 aa)
agaWPutative N-acetylgalactosamine-specific PTS system, IIC component. (259 aa)
agaVN-acetylgalactosamine-specific enzyme IIB component of PTS. (158 aa)
agaZPutative tagatose 6-phosphate kinase. (427 aa)
agaRPutative aga operon transcriptional repressor. (255 aa)
Your Current Organism:
Serratia marcescens
NCBI taxonomy Id: 273526
Other names: S. marcescens subsp. marcescens Db11, Serratia marcescens subsp. marcescens Db11, Serratia marcescens subsp. marcescens str. Db11, Serratia marcescens subsp. marcescens strain Db11
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