STRINGSTRING
EH55_00020 EH55_00020 EH55_10420 EH55_10420 rplA rplA dxr dxr clpX clpX EH55_09905 EH55_09905 EH55_09900 EH55_09900 EH55_09805 EH55_09805 EH55_09725 EH55_09725 EH55_09610 EH55_09610 uvrB uvrB EH55_09495 EH55_09495 EH55_09490 EH55_09490 EH55_09485 EH55_09485 EH55_09280 EH55_09280 EH55_08900 EH55_08900 EH55_08800 EH55_08800 EH55_08675 EH55_08675 EH55_08670 EH55_08670 EH55_08545 EH55_08545 EH55_08540 EH55_08540 EH55_08400 EH55_08400 EH55_08395 EH55_08395 EH55_08370 EH55_08370 EH55_08365 EH55_08365 EH55_08275 EH55_08275 EH55_08265 EH55_08265 EH55_08115 EH55_08115 EH55_07860 EH55_07860 rpsB rpsB EH55_07770 EH55_07770 EH55_07700 EH55_07700 xseA xseA mutL mutL rpmF rpmF EH55_07180 EH55_07180 EH55_07150 EH55_07150 EH55_07100 EH55_07100 EH55_07035 EH55_07035 EH55_06735 EH55_06735 EH55_06680 EH55_06680 EH55_06565 EH55_06565 EH55_06525 EH55_06525 EH55_06440 EH55_06440 EH55_06435 EH55_06435 EH55_06325 EH55_06325 EH55_06255 EH55_06255 EH55_06115 EH55_06115 dnaX dnaX EH55_11430 EH55_11430 cobQ cobQ EH55_11720 EH55_11720 EH55_11725 EH55_11725 EH55_11740 EH55_11740 EH55_11745 EH55_11745 EH55_11795 EH55_11795 EH55_11925 EH55_11925 EH55_12055 EH55_12055 EH55_12060 EH55_12060 EH55_12095 EH55_12095 EH55_12210 EH55_12210 rpoB rpoB rpoC rpoC rpsL rpsL rpsG rpsG rplB rplB rpsS rpsS rplV rplV rplN rplN rpsE rpsE EH55_12465 EH55_12465 rplO rplO rpsD rpsD rpoA rpoA eno eno EH55_12780 EH55_12780 EH55_12805 EH55_12805 EH55_12910 EH55_12910 EH55_13025 EH55_13025 EH55_13060 EH55_13060 EH55_13145 EH55_13145 EH55_13150 EH55_13150 EH55_13230 EH55_13230 EH55_13235 EH55_13235 recD2 recD2 EH55_13610 EH55_13610 EH55_06080 EH55_06080 gatA gatA leuD-3 leuD-3 EH55_05735 EH55_05735 EH55_05660 EH55_05660 EH55_05575 EH55_05575 EH55_05565 EH55_05565 EH55_05560 EH55_05560 EH55_05555 EH55_05555 EH55_05550 EH55_05550 EH55_05545 EH55_05545 atpA-2 atpA-2 atpB-2 atpB-2 atpD-2 atpD-2 leuD leuD leuD-2 leuD-2 EH55_05430 EH55_05430 EH55_05425 EH55_05425 EH55_05415 EH55_05415 EH55_05390 EH55_05390 EH55_05365 EH55_05365 EH55_05235 EH55_05235 EH55_05230 EH55_05230 EH55_05150 EH55_05150 EH55_05145 EH55_05145 EH55_05020 EH55_05020 EH55_04845 EH55_04845 EH55_04840 EH55_04840 EH55_04800 EH55_04800 carA carA EH55_04745 EH55_04745 gpsA gpsA EH55_04460 EH55_04460 EH55_04445 EH55_04445 EH55_04285 EH55_04285 EH55_04275 EH55_04275 EH55_04270 EH55_04270 EH55_04230 EH55_04230 EH55_04225 EH55_04225 EH55_04010 EH55_04010 EH55_03745 EH55_03745 EH55_03515 EH55_03515 ruvB ruvB ruvA ruvA dnaG dnaG EH55_02700 EH55_02700 EH55_02530 EH55_02530 EH55_02410 EH55_02410 EH55_02385 EH55_02385 EH55_02360 EH55_02360 EH55_02250 EH55_02250 glsA glsA EH55_01855 EH55_01855 atpB atpB atpA atpA EH55_01680 EH55_01680 EH55_01675 EH55_01675 EH55_01670 EH55_01670 EH55_01665 EH55_01665 EH55_01660 EH55_01660 atpD atpD trmB trmB EH55_01375 EH55_01375 EH55_01370 EH55_01370 EH55_01210 EH55_01210 EH55_01090 EH55_01090 EH55_01075 EH55_01075 EH55_01055 EH55_01055 EH55_01045 EH55_01045 EH55_00810 EH55_00810 eutC eutC EH55_00670 EH55_00670 EH55_00325 EH55_00325 ffh ffh EH55_00145 EH55_00145 EH55_11095 EH55_11095 EH55_11045 EH55_11045 EH55_11010 EH55_11010 EH55_11000 EH55_11000 xseB xseB EH55_10795 EH55_10795 ribH ribH EH55_10595 EH55_10595
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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EH55_00020Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)
EH55_10420DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (384 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (236 aa)
dxr1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (385 aa)
clpXATP-dependent protease; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (445 aa)
EH55_09905Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
EH55_09900Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
EH55_09805MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
EH55_09725Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
EH55_09610Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (943 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (685 aa)
EH55_09495Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (597 aa)
EH55_09490Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (403 aa)
EH55_09485DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (74 aa)
EH55_09280methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (513 aa)
EH55_08900Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
EH55_08800Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
EH55_08675mRNA interferase YafQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
EH55_08670Translation repressor RelB; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)
EH55_08545Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)
EH55_08540Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
EH55_08400Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
EH55_08395Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)
EH55_08370mRNA interferase YafQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
EH55_08365Translation repressor RelB; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)
EH55_08275tRNA (adenine-N1)-methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. (288 aa)
EH55_08265Hydrogenase expression protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
EH55_08115Hypothetical protein; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (567 aa)
EH55_07860Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family. (324 aa)
rpsB30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. (277 aa)
EH55_07770Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
EH55_07700Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family. (604 aa)
xseAHypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (411 aa)
mutLHypothetical protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (571 aa)
rpmF50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. (66 aa)
EH55_07180Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
EH55_07150ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
EH55_07100Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
EH55_07035Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
EH55_06735Cobalamin biosynthesis protein CbiM; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
EH55_06680Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
EH55_06565Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
EH55_06525Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
EH55_06440Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
EH55_06435Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
EH55_06325Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
EH55_06255Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
EH55_06115Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
dnaXHypothetical protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (575 aa)
EH55_11430Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
cobQCobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (518 aa)
EH55_11720Daunorubicin resistance protein DrrC; Derived by automated computational analysis using gene prediction method: Protein Homology. (758 aa)
EH55_11725Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
EH55_11740Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (848 aa)
EH55_11745NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
EH55_11795Acetohydroxyacid synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (626 aa)
EH55_11925Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (398 aa)
EH55_12055Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)
EH55_12060Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa)
EH55_12095ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
EH55_12210NAD/NADP octopine/nopaline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1223 aa)
rpoCDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1688 aa)
rpsL30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (123 aa)
rpsG30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rplB50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (274 aa)
rpsS30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (97 aa)
rplV50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (110 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rpsE30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (172 aa)
EH55_1246550S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology. (60 aa)
rplO50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (148 aa)
rpsD30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (208 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (356 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (423 aa)
EH55_12780DNA-3-methyladenine glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
EH55_12805Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
EH55_12910Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
EH55_13025Antitoxin HicB; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
EH55_13060Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
EH55_13145Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
EH55_13150Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
EH55_13230Antitoxin HicB; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
EH55_13235Toxin HicA; Derived by automated computational analysis using gene prediction method: Protein Homology. (59 aa)
recD2Recombinase RecD; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. (813 aa)
EH55_13610Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
EH55_06080Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (568 aa)
gatAglutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (490 aa)
leuD-3Hypothetical protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. (163 aa)
EH55_05735Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
EH55_05660Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (569 aa)
EH55_05575Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. (1204 aa)
EH55_05565Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family. (671 aa)
EH55_05560Permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase proteolipid subunit family. (166 aa)
EH55_05555Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
EH55_05550Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
EH55_05545ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
atpA-2ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (599 aa)
atpB-2ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (472 aa)
atpD-2ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (208 aa)
leuD3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. (174 aa)
leuD-23-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. (164 aa)
EH55_05430Citrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (286 aa)
EH55_05425citrate-ACP transferase, the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
EH55_05415Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)
EH55_05390NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
EH55_05365ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
EH55_05235Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (60 aa)
EH55_05230ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
EH55_05150citrate-ACP transferase, the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)
EH55_05145Citrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (292 aa)
EH55_05020Ribonucleoside-triphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (707 aa)
EH55_04845Addiction module toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (89 aa)
EH55_04840Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (82 aa)
EH55_04800Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (669 aa)
carAHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family. (349 aa)
EH55_04745Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
gpsAGlycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (331 aa)
EH55_04460NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
EH55_04445NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
EH55_04285Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
EH55_04275Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
EH55_04270DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
EH55_04230Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (461 aa)
EH55_04225Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)
EH55_04010methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
EH55_03745Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (800 aa)
EH55_03515Amylo-alpha-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (659 aa)
ruvBATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (357 aa)
ruvAHypothetical protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (199 aa)
dnaGHypothetical protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (579 aa)
EH55_02700NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)
EH55_02530ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (612 aa)
EH55_02410HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
EH55_02385Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa)
EH55_02360Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa)
EH55_02250Glycine/sarcosine/betaine reductase complex protein A; GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester; oxidized GrdA is then reduced by thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
glsAHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family. (313 aa)
EH55_01855Phosphoenolpyruvate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
atpBATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (459 aa)
atpAATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (601 aa)
EH55_01680ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
EH55_01675ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
EH55_01670ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase proteolipid subunit family. (141 aa)
EH55_01665ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family. (654 aa)
EH55_01660Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
atpDATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. (206 aa)
trmBHypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (310 aa)
EH55_01375Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
EH55_01370Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)
EH55_01210Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
EH55_01090DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (452 aa)
EH55_01075Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
EH55_01055Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
EH55_01045General secretion pathway protein GspD; Derived by automated computational analysis using gene prediction method: Protein Homology. (680 aa)
EH55_00810Ethanolamine ammonia-lyase; With EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
eutCEthanolamine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the EutC family. (297 aa)
EH55_00670Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
EH55_00325Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
ffhSignal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (456 aa)
EH55_00145Acetolactate synthase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)
EH55_11095Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
EH55_11045Opine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
EH55_11010Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
EH55_11000Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (101 aa)
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (70 aa)
EH55_10795Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (505 aa)
ribH6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (161 aa)
EH55_10595ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
Your Current Organism:
Synergistes jonesii
NCBI taxonomy Id: 2754
Other names: ATCC 49833, S. jonesii, strain 78-1
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