STRINGSTRING
EH55_02795 EH55_02795 EH55_02630 EH55_02630 EH55_02625 EH55_02625 EH55_02595 EH55_02595 tuf-2 tuf-2 rpoC rpoC EH55_02395 EH55_02395 EH55_02385 EH55_02385 EH55_02240 EH55_02240 EH55_01780 EH55_01780 rpoB rpoB EH55_12190 EH55_12190 EH55_12185 EH55_12185 EH55_11910 EH55_11910 EH55_11355 EH55_11355 EH55_10305 EH55_10305 tuf tuf secE secE EH55_09485 EH55_09485 EH55_08065 EH55_08065 EH55_07390 EH55_07390 EH55_01500 EH55_01500 secA secA rpoA rpoA EH55_12775 EH55_12775 EH55_13540 EH55_13540 EH55_13735 EH55_13735 secY secY EH55_00345 EH55_00345 EH55_00155 EH55_00155 EH55_03705 EH55_03705 EH55_03700 EH55_03700 EH55_03165 EH55_03165 secF secF secD secD EH55_04430 EH55_04430 EH55_07265 EH55_07265 EH55_07175 EH55_07175 EH55_06675 EH55_06675 EH55_05740 EH55_05740 EH55_05480 EH55_05480 EH55_04695 EH55_04695
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EH55_02795Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (75 aa)
EH55_02630ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
EH55_02625ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)
EH55_02595Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
tuf-2Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa)
rpoCDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1688 aa)
EH55_02395Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
EH55_02385Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa)
EH55_02240Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
EH55_01780Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1223 aa)
EH55_12190Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
EH55_12185Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
EH55_11910Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (136 aa)
EH55_11355Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
EH55_10305Phosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
tufElongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (60 aa)
EH55_09485DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (74 aa)
EH55_08065Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
EH55_07390Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
EH55_01500MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
secAPreprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (900 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (356 aa)
EH55_12775AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
EH55_13540Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
EH55_13735Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
secYPreprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (431 aa)
EH55_00345AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
EH55_00155Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
EH55_03705ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
EH55_03700ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)
EH55_03165With AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)
secFPreprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (293 aa)
secDPreprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (460 aa)
EH55_04430ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (588 aa)
EH55_07265Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
EH55_07175Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
EH55_06675Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
EH55_05740Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
EH55_05480Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
EH55_04695AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
Your Current Organism:
Synergistes jonesii
NCBI taxonomy Id: 2754
Other names: ATCC 49833, S. jonesii, strain 78-1
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