STRINGSTRING
ODJ58364.1 ODJ58364.1 ODJ60158.1 ODJ60158.1 ODJ60401.1 ODJ60401.1 ODJ60364.1 ODJ60364.1 ODJ59764.1 ODJ59764.1 ODJ59690.1 ODJ59690.1 ODJ58286.1 ODJ58286.1 ODJ58919.1 ODJ58919.1 oppA oppA ODJ58841.1 ODJ58841.1 ODJ58801.1 ODJ58801.1 ODJ58782.1 ODJ58782.1 ODJ58675.1 ODJ58675.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ODJ58364.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
ODJ60158.1Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
ODJ60401.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. (508 aa)
ODJ60364.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
ODJ59764.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
ODJ59690.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)
ODJ58286.1Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family. (443 aa)
ODJ58919.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)
oppAPeptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)
ODJ58841.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (310 aa)
ODJ58801.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
ODJ58782.1Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
ODJ58675.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
Your Current Organism:
Brochothrix thermosphacta
NCBI taxonomy Id: 2756
Other names: ATCC 11509, B. thermosphacta, CCUG 35132, CIP 103251, DSM 20171, IFO 12167, JCM 20628, LMG 17208, LMG:17208, Microbacterium thermosphactum, NBRC 12167, NCIB 10018, NCIB:10018, NCTC 10822
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