10 items (Chondrus crispus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7Q209_CHOCR	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (656 aa)
	R7Q2Z3_CHOCR	Uncharacterized protein. (482 aa)
	R7QEX5_CHOCR	Uncharacterized protein. (572 aa)
	R7QHE9_CHOCR	RWP-RK domain-containing protein. (1047 aa)
	R7QM49_CHOCR	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (641 aa)
	R7QME1_CHOCR	Uncharacterized protein. (502 aa)
	R7QMN5_CHOCR	Uncharacterized protein. (352 aa)
	R7QQ05_CHOCR	Uncharacterized protein. (439 aa)
	R7QQT8_CHOCR	Ribosomal-ubiquitin fusion protein. (163 aa)
	R7QSJ6_CHOCR	Uncharacterized protein. (277 aa)

Your Current Organism:

Chondrus crispus

NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7Q209_CHOCR	R7QEX5_CHOCR	R7Q209	R7QEX5	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.431
R7Q209_CHOCR	R7QMN5_CHOCR	R7Q209	R7QMN5	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.419
R7Q209_CHOCR	R7QSJ6_CHOCR	R7Q209	R7QSJ6	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.419
R7Q2Z3_CHOCR	R7QEX5_CHOCR	R7Q2Z3	R7QEX5	Uncharacterized protein.	Uncharacterized protein.	0.668
R7Q2Z3_CHOCR	R7QME1_CHOCR	R7Q2Z3	R7QME1	Uncharacterized protein.	Uncharacterized protein.	0.765
R7Q2Z3_CHOCR	R7QMN5_CHOCR	R7Q2Z3	R7QMN5	Uncharacterized protein.	Uncharacterized protein.	0.635
R7Q2Z3_CHOCR	R7QQ05_CHOCR	R7Q2Z3	R7QQ05	Uncharacterized protein.	Uncharacterized protein.	0.579
R7Q2Z3_CHOCR	R7QQT8_CHOCR	R7Q2Z3	R7QQT8	Uncharacterized protein.	Ribosomal-ubiquitin fusion protein.	0.785
R7Q2Z3_CHOCR	R7QSJ6_CHOCR	R7Q2Z3	R7QSJ6	Uncharacterized protein.	Uncharacterized protein.	0.635
R7QEX5_CHOCR	R7Q209_CHOCR	R7QEX5	R7Q209	Uncharacterized protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.431
R7QEX5_CHOCR	R7Q2Z3_CHOCR	R7QEX5	R7Q2Z3	Uncharacterized protein.	Uncharacterized protein.	0.668
R7QEX5_CHOCR	R7QHE9_CHOCR	R7QEX5	R7QHE9	Uncharacterized protein.	RWP-RK domain-containing protein.	0.431
R7QEX5_CHOCR	R7QM49_CHOCR	R7QEX5	R7QM49	Uncharacterized protein.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.854
R7QEX5_CHOCR	R7QME1_CHOCR	R7QEX5	R7QME1	Uncharacterized protein.	Uncharacterized protein.	0.767
R7QEX5_CHOCR	R7QMN5_CHOCR	R7QEX5	R7QMN5	Uncharacterized protein.	Uncharacterized protein.	0.780
R7QEX5_CHOCR	R7QQT8_CHOCR	R7QEX5	R7QQT8	Uncharacterized protein.	Ribosomal-ubiquitin fusion protein.	0.653
R7QEX5_CHOCR	R7QSJ6_CHOCR	R7QEX5	R7QSJ6	Uncharacterized protein.	Uncharacterized protein.	0.780
R7QHE9_CHOCR	R7QEX5_CHOCR	R7QHE9	R7QEX5	RWP-RK domain-containing protein.	Uncharacterized protein.	0.431
R7QHE9_CHOCR	R7QMN5_CHOCR	R7QHE9	R7QMN5	RWP-RK domain-containing protein.	Uncharacterized protein.	0.419
R7QHE9_CHOCR	R7QSJ6_CHOCR	R7QHE9	R7QSJ6	RWP-RK domain-containing protein.	Uncharacterized protein.	0.419