Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM1 | LSM4 | R7QB24 | R7QHR4 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.965 |
| LSM1 | LSM4-2 | R7QB24 | R7QMG7 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.965 |
| LSM1 | R7Q284_CHOCR | R7QB24 | R7Q284 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Sm-like protein, LSm3. | 0.997 |
| LSM1 | R7Q4K1_CHOCR | R7QB24 | R7Q4K1 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.801 |
| LSM1 | R7Q9C1_CHOCR | R7QB24 | R7Q9C1 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.438 |
| LSM1 | R7QA43_CHOCR | R7QB24 | R7QA43 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.648 |
| LSM1 | R7QAK9_CHOCR | R7QB24 | R7QAK9 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.465 |
| LSM1 | R7QDA9_CHOCR | R7QB24 | R7QDA9 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.461 |
| LSM1 | R7QEZ6_CHOCR | R7QB24 | R7QEZ6 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 5'-3' exoribonuclease. | 0.410 |
| LSM1 | R7QF74_CHOCR | R7QB24 | R7QF74 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | DEAD box RNA helicase, putative; Belongs to the DEAD box helicase family. | 0.416 |
| LSM1 | R7QGU5_CHOCR | R7QB24 | R7QGU5 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.997 |
| LSM1 | R7QHD4_CHOCR | R7QB24 | R7QHD4 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Probable ATP-dependent RNA helicase DDX46-like. | 0.416 |
| LSM1 | R7QIT8_CHOCR | R7QB24 | R7QIT8 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.801 |
| LSM1 | R7QKP6_CHOCR | R7QB24 | R7QKP6 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Sm protein, snRNP core protein, SmF. | 0.664 |
| LSM1 | R7QLE2_CHOCR | R7QB24 | R7QLE2 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Small nuclear ribonucleoprotein G. | 0.519 |
| LSM1 | R7QMK3_CHOCR | R7QB24 | R7QMK3 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Sm-like protein, LSm6. | 0.997 |
| LSM1 | R7QMY7_CHOCR | R7QB24 | R7QMY7 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.405 |
| LSM1 | R7QN78_CHOCR | R7QB24 | R7QN78 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.580 |
| LSM1 | R7QNL0_CHOCR | R7QB24 | R7QNL0 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.801 |
| LSM1 | R7QNQ8_CHOCR | R7QB24 | R7QNQ8 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Nudix hydrolase domain-containing protein. | 0.911 |
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