(15 nodes) Exoribonuclease activity, producing 5-phosphomonoesters network (Chondrus crispus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	R7Q4R9_CHOCR	RNB domain-containing protein; Belongs to the RNR ribonuclease family. (1159 aa)
	R7QAA1_CHOCR	RNB domain-containing protein. (840 aa)
	R7QL61_CHOCR	S1 motif domain-containing protein. (834 aa)
	R7QNC6_CHOCR	Uncharacterized protein. (261 aa)
	R7QNL0_CHOCR	Uncharacterized protein. (1308 aa)
	R7Q4K1_CHOCR	Uncharacterized protein. (446 aa)
	R7QR64_CHOCR	USP domain-containing protein. (1255 aa)
	R7QSD7_CHOCR	VacB/RNB family exoribonuclease. (744 aa)
	R7Q3D8_CHOCR	Exosome component 10 Rrp6. (954 aa)
	R7Q2V0_CHOCR	Uncharacterized protein. (826 aa)
	R7QEZ6_CHOCR	5'-3' exoribonuclease. (269 aa)
	R7QFI3_CHOCR	Endo/exonuclease/phosphatase domain-containing protein. (465 aa)
	R7QIT8_CHOCR	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (695 aa)
	R7QA44_CHOCR	VacB/RNB family exoribonuclease. (744 aa)
	R7Q841_CHOCR	Endo/exonuclease/phosphatase domain-containing protein. (363 aa)

Your Current Organism:

Chondrus crispus

NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7Q2V0_CHOCR	R7Q3D8_CHOCR	R7Q2V0	R7Q3D8	Uncharacterized protein.	Exosome component 10 Rrp6.	0.694
R7Q2V0_CHOCR	R7Q4R9_CHOCR	R7Q2V0	R7Q4R9	Uncharacterized protein.	RNB domain-containing protein; Belongs to the RNR ribonuclease family.	0.518
R7Q2V0_CHOCR	R7QA44_CHOCR	R7Q2V0	R7QA44	Uncharacterized protein.	VacB/RNB family exoribonuclease.	0.518
R7Q2V0_CHOCR	R7QAA1_CHOCR	R7Q2V0	R7QAA1	Uncharacterized protein.	RNB domain-containing protein.	0.518
R7Q2V0_CHOCR	R7QL61_CHOCR	R7Q2V0	R7QL61	Uncharacterized protein.	S1 motif domain-containing protein.	0.916
R7Q2V0_CHOCR	R7QR64_CHOCR	R7Q2V0	R7QR64	Uncharacterized protein.	USP domain-containing protein.	0.559
R7Q2V0_CHOCR	R7QSD7_CHOCR	R7Q2V0	R7QSD7	Uncharacterized protein.	VacB/RNB family exoribonuclease.	0.518
R7Q3D8_CHOCR	R7Q2V0_CHOCR	R7Q3D8	R7Q2V0	Exosome component 10 Rrp6.	Uncharacterized protein.	0.694
R7Q3D8_CHOCR	R7Q4R9_CHOCR	R7Q3D8	R7Q4R9	Exosome component 10 Rrp6.	RNB domain-containing protein; Belongs to the RNR ribonuclease family.	0.859
R7Q3D8_CHOCR	R7QA44_CHOCR	R7Q3D8	R7QA44	Exosome component 10 Rrp6.	VacB/RNB family exoribonuclease.	0.859
R7Q3D8_CHOCR	R7QAA1_CHOCR	R7Q3D8	R7QAA1	Exosome component 10 Rrp6.	RNB domain-containing protein.	0.859
R7Q3D8_CHOCR	R7QEZ6_CHOCR	R7Q3D8	R7QEZ6	Exosome component 10 Rrp6.	5'-3' exoribonuclease.	0.570
R7Q3D8_CHOCR	R7QL61_CHOCR	R7Q3D8	R7QL61	Exosome component 10 Rrp6.	S1 motif domain-containing protein.	0.694
R7Q3D8_CHOCR	R7QR64_CHOCR	R7Q3D8	R7QR64	Exosome component 10 Rrp6.	USP domain-containing protein.	0.611
R7Q3D8_CHOCR	R7QSD7_CHOCR	R7Q3D8	R7QSD7	Exosome component 10 Rrp6.	VacB/RNB family exoribonuclease.	0.859
R7Q4K1_CHOCR	R7Q4R9_CHOCR	R7Q4K1	R7Q4R9	Uncharacterized protein.	RNB domain-containing protein; Belongs to the RNR ribonuclease family.	0.465
R7Q4K1_CHOCR	R7QA44_CHOCR	R7Q4K1	R7QA44	Uncharacterized protein.	VacB/RNB family exoribonuclease.	0.465
R7Q4K1_CHOCR	R7QAA1_CHOCR	R7Q4K1	R7QAA1	Uncharacterized protein.	RNB domain-containing protein.	0.465
R7Q4K1_CHOCR	R7QEZ6_CHOCR	R7Q4K1	R7QEZ6	Uncharacterized protein.	5'-3' exoribonuclease.	0.431
R7Q4K1_CHOCR	R7QSD7_CHOCR	R7Q4K1	R7QSD7	Uncharacterized protein.	VacB/RNB family exoribonuclease.	0.465