(7 nodes) Proteasome core complex, alpha-subunit complex network (Chondrus crispus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7Q4Z9_CHOCR	Proteasome subunit alpha type. (250 aa)
	R7QE30_CHOCR	Proteasome subunit alpha type. (242 aa)
	R7QEU1_CHOCR	Proteasome subunit alpha type. (260 aa)
	R7QH40_CHOCR	Proteasome subunit alpha type. (235 aa)
	R7QI47_CHOCR	Proteasome subunit alpha type. (251 aa)
	R7QJH5_CHOCR	Proteasome subunit alpha type. (256 aa)
	R7QMV2_CHOCR	Proteasome subunit alpha type. (256 aa)

Your Current Organism:

Chondrus crispus

NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7Q4Z9_CHOCR	R7QE30_CHOCR	R7Q4Z9	R7QE30	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7Q4Z9_CHOCR	R7QEU1_CHOCR	R7Q4Z9	R7QEU1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7Q4Z9_CHOCR	R7QH40_CHOCR	R7Q4Z9	R7QH40	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7Q4Z9_CHOCR	R7QI47_CHOCR	R7Q4Z9	R7QI47	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7Q4Z9_CHOCR	R7QJH5_CHOCR	R7Q4Z9	R7QJH5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7Q4Z9_CHOCR	R7QMV2_CHOCR	R7Q4Z9	R7QMV2	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QE30_CHOCR	R7Q4Z9_CHOCR	R7QE30	R7Q4Z9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QE30_CHOCR	R7QEU1_CHOCR	R7QE30	R7QEU1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QE30_CHOCR	R7QH40_CHOCR	R7QE30	R7QH40	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QE30_CHOCR	R7QI47_CHOCR	R7QE30	R7QI47	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QE30_CHOCR	R7QJH5_CHOCR	R7QE30	R7QJH5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QE30_CHOCR	R7QMV2_CHOCR	R7QE30	R7QMV2	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QEU1_CHOCR	R7Q4Z9_CHOCR	R7QEU1	R7Q4Z9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QEU1_CHOCR	R7QE30_CHOCR	R7QEU1	R7QE30	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QEU1_CHOCR	R7QH40_CHOCR	R7QEU1	R7QH40	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QEU1_CHOCR	R7QI47_CHOCR	R7QEU1	R7QI47	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QEU1_CHOCR	R7QJH5_CHOCR	R7QEU1	R7QJH5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QEU1_CHOCR	R7QMV2_CHOCR	R7QEU1	R7QMV2	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QH40_CHOCR	R7Q4Z9_CHOCR	R7QH40	R7Q4Z9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
R7QH40_CHOCR	R7QE30_CHOCR	R7QH40	R7QE30	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999