STRINGSTRING
R7QE58_CHOCR R7QE58_CHOCR R7QE13_CHOCR R7QE13_CHOCR R7QDY7_CHOCR R7QDY7_CHOCR R7QDN9_CHOCR R7QDN9_CHOCR R7QCH3_CHOCR R7QCH3_CHOCR R7QCA9_CHOCR R7QCA9_CHOCR R7QB27_CHOCR R7QB27_CHOCR R7QAD2_CHOCR R7QAD2_CHOCR R7QA68_CHOCR R7QA68_CHOCR R7Q9Q4_CHOCR R7Q9Q4_CHOCR R7QL20_CHOCR R7QL20_CHOCR R7QKZ6_CHOCR R7QKZ6_CHOCR R7QKT3_CHOCR R7QKT3_CHOCR R7QJX3_CHOCR R7QJX3_CHOCR R7QJ89_CHOCR R7QJ89_CHOCR R7QHR5_CHOCR R7QHR5_CHOCR R7QHH1_CHOCR R7QHH1_CHOCR R7QFG1_CHOCR R7QFG1_CHOCR R7QF46_CHOCR R7QF46_CHOCR R7QF23_CHOCR R7QF23_CHOCR R7QEE8_CHOCR R7QEE8_CHOCR R7QL67_CHOCR R7QL67_CHOCR R7QM93_CHOCR R7QM93_CHOCR R7QMY2_CHOCR R7QMY2_CHOCR R7QRU2_CHOCR R7QRU2_CHOCR R7QR79_CHOCR R7QR79_CHOCR R7QQE1_CHOCR R7QQE1_CHOCR R7Q519_CHOCR R7Q519_CHOCR R7Q541_CHOCR R7Q541_CHOCR R7Q5H7_CHOCR R7Q5H7_CHOCR R7Q6W1_CHOCR R7Q6W1_CHOCR R7Q8G7_CHOCR R7Q8G7_CHOCR R7Q8T5_CHOCR R7Q8T5_CHOCR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
R7QE58_CHOCRVacuolar protein sorting 4b; Belongs to the AAA ATPase family. (448 aa)
R7QE13_CHOCRAP-3 complex subunit mu; Belongs to the adaptor complexes medium subunit family. (457 aa)
R7QDY7_CHOCRClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1379 aa)
R7QDN9_CHOCRSmall GTP-binding protein Sar1; Belongs to the small GTPase superfamily. SAR1 family. (189 aa)
R7QCH3_CHOCRUncharacterized protein. (244 aa)
R7QCA9_CHOCRUncharacterized protein. (431 aa)
R7QB27_CHOCRFPL domain-containing protein. (953 aa)
R7QAD2_CHOCRUncharacterized protein. (177 aa)
R7QA68_CHOCRCoatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (293 aa)
R7Q9Q4_CHOCRCoatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (914 aa)
R7QL20_CHOCRArl8; Belongs to the small GTPase superfamily. Arf family. (213 aa)
R7QKZ6_CHOCRProtein transport protein Sec24-like. (1116 aa)
R7QKT3_CHOCRProtein transport protein Sec24-like. (859 aa)
R7QJX3_CHOCRClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1776 aa)
R7QJ89_CHOCRProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (764 aa)
R7QHR5_CHOCRUncharacterized protein; Belongs to the VPS28 family. (240 aa)
R7QHH1_CHOCRArginine deiminase. (470 aa)
R7QFG1_CHOCRWD_REPEATS_REGION domain-containing protein. (1246 aa)
R7QF46_CHOCRAAA domain-containing protein; Belongs to the AAA ATPase family. (537 aa)
R7QF23_CHOCRWD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (359 aa)
R7QEE8_CHOCRUso1_p115_head domain-containing protein. (2520 aa)
R7QL67_CHOCRCOPI_C domain-containing protein. (765 aa)
R7QM93_CHOCRPutative Vesicle transport v-SNARE. (241 aa)
R7QMY2_CHOCRCoatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (576 aa)
R7QRU2_CHOCRCoatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1269 aa)
R7QR79_CHOCRProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (703 aa)
R7QQE1_CHOCRUncharacterized protein; Belongs to the AAA ATPase family. (464 aa)
R7Q519_CHOCRAP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (934 aa)
R7Q541_CHOCRVacuolar sorting protein SNF8. (176 aa)
R7Q5H7_CHOCRCoatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (912 aa)
R7Q6W1_CHOCRUncharacterized protein. (715 aa)
R7Q8G7_CHOCRCoatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (159 aa)
R7Q8T5_CHOCRCoatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (963 aa)
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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