25 items (Chondrus crispus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	psbZ	Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family. (62 aa)
	psaE	Photosystem I subunit IV. (61 aa)
	psbL	Photosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. (38 aa)
	ycf22	Conserved hypothetical plastid protein. (218 aa)
	ycf60	Conserved hypothetical plastid protein. (204 aa)
	cemA	Chloroplast envelope membrane protein; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake. (278 aa)
	R7Q3D0_CHOCR	Uncharacterized protein. (441 aa)
	R7Q4C9_CHOCR	Uncharacterized protein. (255 aa)
	R7Q4M3_CHOCR	Uncharacterized protein. (438 aa)
	R7Q4P0_CHOCR	Monogalactosyldiacylglycerol synthase, family GT28. (384 aa)
	R7Q5Y6_CHOCR	Plastid oxygen-evolving enhancer 1. (244 aa)
	R7Q649_CHOCR	Monogalactosyldiacylglycerol synthase, family GT28. (526 aa)
	R7Q6P3_CHOCR	Uncharacterized protein. (182 aa)
	R7QBW9_CHOCR	Putative plastid geranylgeranyl reductase precusor. (468 aa)
	R7QGA1_CHOCR	Carotene isomerase. (585 aa)
	R7QLC6_CHOCR	Uncharacterized protein. (427 aa)
	R7QMP1_CHOCR	Uncharacterized protein. (482 aa)
	R7QP96_CHOCR	Uncharacterized protein. (338 aa)
	R7QPK6_CHOCR	Digalactosyldiacylglycerol synthase, family GT4. (419 aa)
	R7QPP9_CHOCR	Monogalactosyldiacylglycerol synthase, family GT28. (377 aa)
	R7QTB0_CHOCR	DUF3479 domain-containing protein. (1131 aa)
	R7QV52_CHOCR	Magnesium chelatase subunit H. (1388 aa)
	S0F3V5_CHOCR	Uncharacterized protein. (244 aa)
	S0F2S3_CHOCR	Uncharacterized protein. (205 aa)
	ccdA	Cytochrome c biogenesis protein transmembrane region. (246 aa)

Your Current Organism:

Chondrus crispus

NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7Q3D0_CHOCR	R7QP96_CHOCR	R7Q3D0	R7QP96	Uncharacterized protein.	Uncharacterized protein.	0.402
R7Q4C9_CHOCR	R7QBW9_CHOCR	R7Q4C9	R7QBW9	Uncharacterized protein.	Putative plastid geranylgeranyl reductase precusor.	0.527
R7Q4M3_CHOCR	R7QP96_CHOCR	R7Q4M3	R7QP96	Uncharacterized protein.	Uncharacterized protein.	0.409
R7Q4P0_CHOCR	R7Q649_CHOCR	R7Q4P0	R7Q649	Monogalactosyldiacylglycerol synthase, family GT28.	Monogalactosyldiacylglycerol synthase, family GT28.	0.904
R7Q4P0_CHOCR	R7QPK6_CHOCR	R7Q4P0	R7QPK6	Monogalactosyldiacylglycerol synthase, family GT28.	Digalactosyldiacylglycerol synthase, family GT4.	0.928
R7Q4P0_CHOCR	R7QPP9_CHOCR	R7Q4P0	R7QPP9	Monogalactosyldiacylglycerol synthase, family GT28.	Monogalactosyldiacylglycerol synthase, family GT28.	0.905
R7Q5Y6_CHOCR	R7Q6P3_CHOCR	R7Q5Y6	R7Q6P3	Plastid oxygen-evolving enhancer 1.	Uncharacterized protein.	0.530
R7Q5Y6_CHOCR	R7QP96_CHOCR	R7Q5Y6	R7QP96	Plastid oxygen-evolving enhancer 1.	Uncharacterized protein.	0.430
R7Q5Y6_CHOCR	S0F2S3_CHOCR	R7Q5Y6	S0F2S3	Plastid oxygen-evolving enhancer 1.	Uncharacterized protein.	0.606
R7Q5Y6_CHOCR	psaE	R7Q5Y6	M5DCU2	Plastid oxygen-evolving enhancer 1.	Photosystem I subunit IV.	0.776
R7Q5Y6_CHOCR	psbL	R7Q5Y6	M5DD55	Plastid oxygen-evolving enhancer 1.	Photosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.	0.996
R7Q5Y6_CHOCR	psbZ	R7Q5Y6	M5DBS6	Plastid oxygen-evolving enhancer 1.	Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family.	0.969
R7Q649_CHOCR	R7Q4P0_CHOCR	R7Q649	R7Q4P0	Monogalactosyldiacylglycerol synthase, family GT28.	Monogalactosyldiacylglycerol synthase, family GT28.	0.904
R7Q649_CHOCR	R7QPK6_CHOCR	R7Q649	R7QPK6	Monogalactosyldiacylglycerol synthase, family GT28.	Digalactosyldiacylglycerol synthase, family GT4.	0.928
R7Q649_CHOCR	R7QPP9_CHOCR	R7Q649	R7QPP9	Monogalactosyldiacylglycerol synthase, family GT28.	Monogalactosyldiacylglycerol synthase, family GT28.	0.903
R7Q6P3_CHOCR	R7Q5Y6_CHOCR	R7Q6P3	R7Q5Y6	Uncharacterized protein.	Plastid oxygen-evolving enhancer 1.	0.530
R7QBW9_CHOCR	R7Q4C9_CHOCR	R7QBW9	R7Q4C9	Putative plastid geranylgeranyl reductase precusor.	Uncharacterized protein.	0.527
R7QBW9_CHOCR	R7QGA1_CHOCR	R7QBW9	R7QGA1	Putative plastid geranylgeranyl reductase precusor.	Carotene isomerase.	0.739
R7QBW9_CHOCR	R7QTB0_CHOCR	R7QBW9	R7QTB0	Putative plastid geranylgeranyl reductase precusor.	DUF3479 domain-containing protein.	0.683
R7QBW9_CHOCR	R7QV52_CHOCR	R7QBW9	R7QV52	Putative plastid geranylgeranyl reductase precusor.	Magnesium chelatase subunit H.	0.739