STRINGSTRING
R7QRT5_CHOCR R7QRT5_CHOCR R7QME0_CHOCR R7QME0_CHOCR R7Q2M4_CHOCR R7Q2M4_CHOCR R7QR51_CHOCR R7QR51_CHOCR R7QVA5_CHOCR R7QVA5_CHOCR S0F300_CHOCR S0F300_CHOCR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
R7QRT5_CHOCRSt-SNARE family protein. (372 aa)
R7QME0_CHOCRContaining a SNARE domain. (272 aa)
R7Q2M4_CHOCRSyntaxin; Belongs to the syntaxin family. (337 aa)
R7QR51_CHOCRBet1. (122 aa)
R7QVA5_CHOCRSyntaxin; Belongs to the syntaxin family. (322 aa)
S0F300_CHOCRt-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (342 aa)
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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