STRINGSTRING
R7QB54_CHOCR R7QB54_CHOCR R7QDV5_CHOCR R7QDV5_CHOCR R7QFK3_CHOCR R7QFK3_CHOCR R7QG20_CHOCR R7QG20_CHOCR R7QGQ7_CHOCR R7QGQ7_CHOCR R7QJF5_CHOCR R7QJF5_CHOCR R7QMD3_CHOCR R7QMD3_CHOCR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
R7QB54_CHOCRUncharacterized protein. (690 aa)
R7QDV5_CHOCRSimilar to DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57. (1349 aa)
R7QFK3_CHOCRUncharacterized protein. (1088 aa)
R7QG20_CHOCRPutative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like. (858 aa)
R7QGQ7_CHOCRPredicted pre-mRNA splicing factor ATP-dependent RNA helicase PRP43. (768 aa)
R7QJF5_CHOCRSimilarity to pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (735 aa)
R7QMD3_CHOCRPutative ATP-dependent RNA helicase DHX8. (1159 aa)
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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