(9 nodes) 50S ribosomal protein L30e-like network (Chondrus crispus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7Q804_CHOCR	Uncharacterized protein. (230 aa)
	R7QT73_CHOCR	SpoU_sub_bind domain-containing protein. (298 aa)
	R7QG40_CHOCR	60S ribosomal protein L7a. (268 aa)
	R7QD96_CHOCR	60S ribosomal protein L30. (111 aa)
	R7QD51_CHOCR	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	R7QCR1_CHOCR	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (191 aa)
	R7QB31_CHOCR	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (154 aa)
	R7QAN7_CHOCR	Peptide chain release factor eRF, subunit 1. (441 aa)
	R7QAC3_CHOCR	Ribosomal_L7Ae domain-containing protein. (221 aa)

Your Current Organism:

Chondrus crispus

NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7Q804_CHOCR	R7QAC3_CHOCR	R7Q804	R7QAC3	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.445
R7Q804_CHOCR	R7QAN7_CHOCR	R7Q804	R7QAN7	Uncharacterized protein.	Peptide chain release factor eRF, subunit 1.	0.503
R7Q804_CHOCR	R7QB31_CHOCR	R7Q804	R7QB31	Uncharacterized protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.847
R7Q804_CHOCR	R7QCR1_CHOCR	R7Q804	R7QCR1	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.468
R7Q804_CHOCR	R7QD51_CHOCR	R7Q804	R7QD51	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.445
R7Q804_CHOCR	R7QD96_CHOCR	R7Q804	R7QD96	Uncharacterized protein.	60S ribosomal protein L30.	0.831
R7Q804_CHOCR	R7QG40_CHOCR	R7Q804	R7QG40	Uncharacterized protein.	60S ribosomal protein L7a.	0.812
R7QAC3_CHOCR	R7Q804_CHOCR	R7QAC3	R7Q804	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.445
R7QAC3_CHOCR	R7QAN7_CHOCR	R7QAC3	R7QAN7	Ribosomal_L7Ae domain-containing protein.	Peptide chain release factor eRF, subunit 1.	0.446
R7QAC3_CHOCR	R7QB31_CHOCR	R7QAC3	R7QB31	Ribosomal_L7Ae domain-containing protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.747
R7QAC3_CHOCR	R7QCR1_CHOCR	R7QAC3	R7QCR1	Ribosomal_L7Ae domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.868
R7QAC3_CHOCR	R7QD96_CHOCR	R7QAC3	R7QD96	Ribosomal_L7Ae domain-containing protein.	60S ribosomal protein L30.	0.924
R7QAN7_CHOCR	R7Q804_CHOCR	R7QAN7	R7Q804	Peptide chain release factor eRF, subunit 1.	Uncharacterized protein.	0.503
R7QAN7_CHOCR	R7QAC3_CHOCR	R7QAN7	R7QAC3	Peptide chain release factor eRF, subunit 1.	Ribosomal_L7Ae domain-containing protein.	0.446
R7QAN7_CHOCR	R7QB31_CHOCR	R7QAN7	R7QB31	Peptide chain release factor eRF, subunit 1.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.610
R7QAN7_CHOCR	R7QCR1_CHOCR	R7QAN7	R7QCR1	Peptide chain release factor eRF, subunit 1.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.546
R7QAN7_CHOCR	R7QD51_CHOCR	R7QAN7	R7QD51	Peptide chain release factor eRF, subunit 1.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.446
R7QAN7_CHOCR	R7QD96_CHOCR	R7QAN7	R7QD96	Peptide chain release factor eRF, subunit 1.	60S ribosomal protein L30.	0.549
R7QAN7_CHOCR	R7QG40_CHOCR	R7QAN7	R7QG40	Peptide chain release factor eRF, subunit 1.	60S ribosomal protein L7a.	0.528
R7QB31_CHOCR	R7Q804_CHOCR	R7QB31	R7Q804	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Uncharacterized protein.	0.847