(11 nodes) TCP-1/cpn60 chaperonin family network (Chondrus crispus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7QJE2_CHOCR	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (493 aa)
	R7QVI7_CHOCR	Uncharacterized protein. (537 aa)
	R7QQU1_CHOCR	Uncharacterized protein. (544 aa)
	R7QIU3_CHOCR	Chaperonine 60; Belongs to the chaperonin (HSP60) family. (585 aa)
	R7QGS2_CHOCR	T-complex protein 1 subunit delta. (558 aa)
	R7QDJ8_CHOCR	Chaperonine 60; Belongs to the chaperonin (HSP60) family. (577 aa)
	R7QDI5_CHOCR	Uncharacterized protein. (529 aa)
	R7QBC2_CHOCR	Uncharacterized protein. (538 aa)
	R7Q4R4_CHOCR	T-complex protein 1 subunit gamma. (547 aa)
	R7Q2X1_CHOCR	Uncharacterized protein. (546 aa)
	groL	60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (526 aa)

Your Current Organism:

Chondrus crispus

NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7Q2X1_CHOCR	R7Q4R4_CHOCR	R7Q2X1	R7Q4R4	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.999
R7Q2X1_CHOCR	R7QBC2_CHOCR	R7Q2X1	R7QBC2	Uncharacterized protein.	Uncharacterized protein.	0.999
R7Q2X1_CHOCR	R7QDI5_CHOCR	R7Q2X1	R7QDI5	Uncharacterized protein.	Uncharacterized protein.	0.999
R7Q2X1_CHOCR	R7QDJ8_CHOCR	R7Q2X1	R7QDJ8	Uncharacterized protein.	Chaperonine 60; Belongs to the chaperonin (HSP60) family.	0.754
R7Q2X1_CHOCR	R7QGS2_CHOCR	R7Q2X1	R7QGS2	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.999
R7Q2X1_CHOCR	R7QIU3_CHOCR	R7Q2X1	R7QIU3	Uncharacterized protein.	Chaperonine 60; Belongs to the chaperonin (HSP60) family.	0.754
R7Q2X1_CHOCR	R7QJE2_CHOCR	R7Q2X1	R7QJE2	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
R7Q2X1_CHOCR	R7QQU1_CHOCR	R7Q2X1	R7QQU1	Uncharacterized protein.	Uncharacterized protein.	0.999
R7Q2X1_CHOCR	R7QVI7_CHOCR	R7Q2X1	R7QVI7	Uncharacterized protein.	Uncharacterized protein.	0.999
R7Q2X1_CHOCR	groL	R7Q2X1	M5DBM3	Uncharacterized protein.	60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.	0.754
R7Q4R4_CHOCR	R7Q2X1_CHOCR	R7Q4R4	R7Q2X1	T-complex protein 1 subunit gamma.	Uncharacterized protein.	0.999
R7Q4R4_CHOCR	R7QBC2_CHOCR	R7Q4R4	R7QBC2	T-complex protein 1 subunit gamma.	Uncharacterized protein.	0.999
R7Q4R4_CHOCR	R7QDI5_CHOCR	R7Q4R4	R7QDI5	T-complex protein 1 subunit gamma.	Uncharacterized protein.	0.998
R7Q4R4_CHOCR	R7QGS2_CHOCR	R7Q4R4	R7QGS2	T-complex protein 1 subunit gamma.	T-complex protein 1 subunit delta.	0.998
R7Q4R4_CHOCR	R7QJE2_CHOCR	R7Q4R4	R7QJE2	T-complex protein 1 subunit gamma.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
R7Q4R4_CHOCR	R7QQU1_CHOCR	R7Q4R4	R7QQU1	T-complex protein 1 subunit gamma.	Uncharacterized protein.	0.999
R7Q4R4_CHOCR	R7QVI7_CHOCR	R7Q4R4	R7QVI7	T-complex protein 1 subunit gamma.	Uncharacterized protein.	0.999
R7QBC2_CHOCR	R7Q2X1_CHOCR	R7QBC2	R7Q2X1	Uncharacterized protein.	Uncharacterized protein.	0.999
R7QBC2_CHOCR	R7Q4R4_CHOCR	R7QBC2	R7Q4R4	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.999
R7QBC2_CHOCR	R7QDI5_CHOCR	R7QBC2	R7QDI5	Uncharacterized protein.	Uncharacterized protein.	0.999