(24 nodes) Amino sugar and nucleotide sugar metabolism network (Chondrus crispus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7Q0G1_CHOCR	Uncharacterized protein. (442 aa)
	R7Q0Z6_CHOCR	UDP-glucuronic acid decarboxylase UXS. (357 aa)
	R7Q4W3_CHOCR	Uncharacterized protein. (582 aa)
	R7Q5F6_CHOCR	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (249 aa)
	R7Q5R1_CHOCR	Glucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
	R7Q5U6_CHOCR	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (344 aa)
	R7Q6V0_CHOCR	Uncharacterized protein. (675 aa)
	R7Q9V0_CHOCR	Epimerase domain-containing protein. (238 aa)
	R7QA54_CHOCR	UDP-sulfoquinovose synthase, chloroplastic, SQD1. (504 aa)
	R7QDM2_CHOCR	Glucosamine 6-phosphate N-acetyltransferase; Belongs to the acetyltransferase family. GNA1 subfamily. (145 aa)
	R7QEJ4_CHOCR	UDP-glucuronic acid decarboxylase UXS. (408 aa)
	R7QHD2_CHOCR	Phosphoglucomutase; Belongs to the phosphohexose mutase family. (584 aa)
	R7QHD6_CHOCR	UTP--glucose-1-phosphate uridylyltransferase. (503 aa)
	R7QHL6_CHOCR	Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family. (382 aa)
	R7QI35_CHOCR	Uncharacterized protein. (657 aa)
	R7QKI3_CHOCR	Uncharacterized protein. (676 aa)
	R7QM56_CHOCR	Uncharacterized protein. (654 aa)
	R7QML4_CHOCR	Glucose-6-phosphate isomerase; Belongs to the GPI family. (583 aa)
	R7QPL1_CHOCR	dTDP-glucose 4,6-dehydratase. (372 aa)
	R7QPZ3_CHOCR	Uncharacterized protein. (507 aa)
	R7QR72_CHOCR	Mannose-1-phosphate guanylyltransferase. (358 aa)
	R7QUS9_CHOCR	NAD-dependent sugar epimerase. (350 aa)
	R7QVW0_CHOCR	Epimerase domain-containing protein. (291 aa)
	S0F2W5_CHOCR	UDP-glucose dehydrogenase. (586 aa)

Your Current Organism:

Chondrus crispus

NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7Q0G1_CHOCR	R7Q4W3_CHOCR	R7Q0G1	R7Q4W3	Uncharacterized protein.	Uncharacterized protein.	0.677
R7Q0G1_CHOCR	R7Q5R1_CHOCR	R7Q0G1	R7Q5R1	Uncharacterized protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.976
R7Q0G1_CHOCR	R7Q6V0_CHOCR	R7Q0G1	R7Q6V0	Uncharacterized protein.	Uncharacterized protein.	0.972
R7Q0G1_CHOCR	R7QHD2_CHOCR	R7Q0G1	R7QHD2	Uncharacterized protein.	Phosphoglucomutase; Belongs to the phosphohexose mutase family.	0.972
R7Q0G1_CHOCR	R7QI35_CHOCR	R7Q0G1	R7QI35	Uncharacterized protein.	Uncharacterized protein.	0.966
R7Q0G1_CHOCR	R7QML4_CHOCR	R7Q0G1	R7QML4	Uncharacterized protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.976
R7Q0Z6_CHOCR	R7QEJ4_CHOCR	R7Q0Z6	R7QEJ4	UDP-glucuronic acid decarboxylase UXS.	UDP-glucuronic acid decarboxylase UXS.	0.901
R7Q0Z6_CHOCR	R7QPL1_CHOCR	R7Q0Z6	R7QPL1	UDP-glucuronic acid decarboxylase UXS.	dTDP-glucose 4,6-dehydratase.	0.529
R7Q0Z6_CHOCR	R7QR72_CHOCR	R7Q0Z6	R7QR72	UDP-glucuronic acid decarboxylase UXS.	Mannose-1-phosphate guanylyltransferase.	0.477
R7Q0Z6_CHOCR	R7QVW0_CHOCR	R7Q0Z6	R7QVW0	UDP-glucuronic acid decarboxylase UXS.	Epimerase domain-containing protein.	0.923
R7Q0Z6_CHOCR	S0F2W5_CHOCR	R7Q0Z6	S0F2W5	UDP-glucuronic acid decarboxylase UXS.	UDP-glucose dehydrogenase.	0.991
R7Q4W3_CHOCR	R7Q0G1_CHOCR	R7Q4W3	R7Q0G1	Uncharacterized protein.	Uncharacterized protein.	0.677
R7Q4W3_CHOCR	R7Q5F6_CHOCR	R7Q4W3	R7Q5F6	Uncharacterized protein.	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.	0.469
R7Q4W3_CHOCR	R7Q5R1_CHOCR	R7Q4W3	R7Q5R1	Uncharacterized protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.655
R7Q4W3_CHOCR	R7Q6V0_CHOCR	R7Q4W3	R7Q6V0	Uncharacterized protein.	Uncharacterized protein.	0.706
R7Q4W3_CHOCR	R7QDM2_CHOCR	R7Q4W3	R7QDM2	Uncharacterized protein.	Glucosamine 6-phosphate N-acetyltransferase; Belongs to the acetyltransferase family. GNA1 subfamily.	0.983
R7Q4W3_CHOCR	R7QHD2_CHOCR	R7Q4W3	R7QHD2	Uncharacterized protein.	Phosphoglucomutase; Belongs to the phosphohexose mutase family.	0.706
R7Q4W3_CHOCR	R7QHD6_CHOCR	R7Q4W3	R7QHD6	Uncharacterized protein.	UTP--glucose-1-phosphate uridylyltransferase.	0.772
R7Q4W3_CHOCR	R7QHL6_CHOCR	R7Q4W3	R7QHL6	Uncharacterized protein.	Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.	0.757
R7Q4W3_CHOCR	R7QM56_CHOCR	R7Q4W3	R7QM56	Uncharacterized protein.	Uncharacterized protein.	0.813