(104 nodes) Ribosome network (Chondrus crispus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpl36	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (37 aa)
	rpl32	50S ribosomal protein L32. (54 aa)
	rps12	30S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (124 aa)
	rps14	30S ribosomal protein S14. (100 aa)
	rps16	30S ribosomal protein S16. (77 aa)
	rpl24	50S ribosomal protein L24. (115 aa)
	rps19	30S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (92 aa)
	R7Q325_CHOCR	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (390 aa)
	R7Q341_CHOCR	Uncharacterized protein. (112 aa)
	R7Q360_CHOCR	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (232 aa)
	R7Q390_CHOCR	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (82 aa)
	R7Q3B7_CHOCR	Ribosomal protein L24. (145 aa)
	R7Q3M5_CHOCR	Uncharacterized protein. (322 aa)
	R7Q4P7_CHOCR	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (148 aa)
	R7Q4U9_CHOCR	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (255 aa)
	R7Q4Z1_CHOCR	40S ribosomal protein S11. (153 aa)
	R7Q5Q8_CHOCR	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (266 aa)
	R7Q674_CHOCR	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (144 aa)
	R7Q689_CHOCR	Ribosomal protein L37; Binds to the 23S rRNA. (93 aa)
	R7Q697_CHOCR	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
	R7Q6A7_CHOCR	Uncharacterized protein. (68 aa)
	R7Q6M6_CHOCR	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	R7Q712_CHOCR	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (212 aa)
	R7Q7A5_CHOCR	S10_plectin domain-containing protein. (146 aa)
	R7Q7E4_CHOCR	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (120 aa)
	R7Q7L5_CHOCR	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (124 aa)
	R7Q7R1_CHOCR	Ribosomal protein S9 family protein; Belongs to the universal ribosomal protein uS9 family. (158 aa)
	R7Q7S1_CHOCR	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (408 aa)
	R7Q7T3_CHOCR	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (97 aa)
	R7Q7Z0_CHOCR	60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (203 aa)
	R7Q7Z3_CHOCR	40S ribosomal protein S20. (118 aa)
	R7Q857_CHOCR	Uncharacterized protein. (117 aa)
	R7Q865_CHOCR	Uncharacterized protein. (225 aa)
	R7Q8B4_CHOCR	Ribosomal_L2_C domain-containing protein. (253 aa)
	R7Q8F1_CHOCR	Uncharacterized protein. (198 aa)
	R7Q8R5_CHOCR	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (147 aa)
	R7Q968_CHOCR	60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. (116 aa)
	R7QA05_CHOCR	Uncharacterized protein. (224 aa)
	R7QA11_CHOCR	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (259 aa)
	R7QAG8_CHOCR	40S ribosomal protein S29. (56 aa)
	R7QAW4_CHOCR	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (174 aa)
	R7QB31_CHOCR	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (154 aa)
	R7QBF3_CHOCR	Ribosomal_L18e/L15P domain-containing protein. (185 aa)
	R7QBF5_CHOCR	60S ribosomal protein L14. (135 aa)
	R7QC29_CHOCR	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
	R7QC50_CHOCR	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (71 aa)
	R7QCC6_CHOCR	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (142 aa)
	R7QCM0_CHOCR	40S ribosomal protein S17. (134 aa)
	R7QCQ3_CHOCR	60S ribosomal protein L7. (273 aa)
	R7QCS3_CHOCR	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (193 aa)
	R7QCS4_CHOCR	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (182 aa)
	R7QCV4_CHOCR	Uncharacterized protein. (208 aa)
	R7QD96_CHOCR	60S ribosomal protein L30. (111 aa)
	R7QDX6_CHOCR	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (106 aa)
	R7QEX3_CHOCR	Uncharacterized protein. (147 aa)
	R7QFT3_CHOCR	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (148 aa)
	R7QG00_CHOCR	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (154 aa)
	R7QG40_CHOCR	60S ribosomal protein L7a. (268 aa)
	R7QGC6_CHOCR	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (143 aa)
	R7QGG9_CHOCR	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (204 aa)
	R7QHE3_CHOCR	Uncharacterized protein. (234 aa)
	R7QHG8_CHOCR	60S ribosomal protein L27A; Belongs to the universal ribosomal protein uL15 family. (147 aa)
	R7QHH9_CHOCR	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	R7QHL5_CHOCR	Uncharacterized protein. (91 aa)
	R7QI22_CHOCR	40S ribosomal protein S28. (65 aa)
	R7QI41_CHOCR	60S ribosomal protein L37a. (94 aa)
	R7QIG4_CHOCR	Ribosomal protein L10, partial. (127 aa)
	R7QIR4_CHOCR	Ribosomal protein L24. (163 aa)
	R7QIX6_CHOCR	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (137 aa)
	R7QJ23_CHOCR	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	R7QJN3_CHOCR	60S ribosomal protein L9. (188 aa)
	R7QJN9_CHOCR	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (216 aa)
	R7QJQ7_CHOCR	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (230 aa)
	R7QJT8_CHOCR	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (144 aa)
	R7QK75_CHOCR	Ribosomal_L18_c domain-containing protein. (296 aa)
	R7QK82_CHOCR	Uncharacterized protein. (250 aa)
	R7QKP4_CHOCR	Ribosomal protein L26. (144 aa)
	R7QKR3_CHOCR	Uncharacterized protein. (68 aa)
	R7QKX0_CHOCR	Uncharacterized protein. (119 aa)
	R7QKX9_CHOCR	30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. (200 aa)
	R7QLJ6_CHOCR	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (226 aa)
	R7QM70_CHOCR	Uncharacterized protein. (91 aa)
	R7QMV0_CHOCR	Uncharacterized protein. (68 aa)
	R7QMW1_CHOCR	Component of cytosolic 80S ribosome and 60S large subunit. (366 aa)
	R7QMX8_CHOCR	Uncharacterized protein. (189 aa)
	R7QN89_CHOCR	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (184 aa)
	R7QNJ5_CHOCR	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (143 aa)
	R7QNP2_CHOCR	60S ribosomal protein L22. (122 aa)
	R7QP79_CHOCR	30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. (178 aa)
	R7QPD5_CHOCR	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (237 aa)
	R7QPF2_CHOCR	60S acidic ribosomal protein P0. (328 aa)
	R7QPF3_CHOCR	60S ribosomal protein L39. (51 aa)
	R7QPT0_CHOCR	Uncharacterized protein. (228 aa)
	R7QQ26_CHOCR	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (193 aa)
	R7QQB5_CHOCR	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (265 aa)
	R7QQT8_CHOCR	Ribosomal-ubiquitin fusion protein. (163 aa)
	R7QR20_CHOCR	Uncharacterized protein. (85 aa)
	R7QRC1_CHOCR	Ribosomal_L18e/L15P domain-containing protein. (251 aa)
	R7QRP4_CHOCR	Uncharacterized protein. (159 aa)
	R7QRQ3_CHOCR	40S ribosomal protein S15a. (129 aa)
	R7QSW9_CHOCR	Uncharacterized protein. (159 aa)
	R7QTX2_CHOCR	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (316 aa)
	R7QUX6_CHOCR	60S ribosomal protein L31. (116 aa)
	R7QUY8_CHOCR	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (112 aa)

Your Current Organism:

Chondrus crispus

NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7Q325_CHOCR	R7Q341_CHOCR	R7Q325	R7Q341	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein.	0.826
R7Q325_CHOCR	R7Q390_CHOCR	R7Q325	R7Q390	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.998
R7Q325_CHOCR	R7Q3B7_CHOCR	R7Q325	R7Q3B7	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L24.	0.999
R7Q325_CHOCR	R7Q3M5_CHOCR	R7Q325	R7Q3M5	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein.	0.999
R7Q325_CHOCR	R7Q4P7_CHOCR	R7Q325	R7Q4P7	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.998
R7Q325_CHOCR	R7Q4U9_CHOCR	R7Q325	R7Q4U9	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.976
R7Q325_CHOCR	R7Q4Z1_CHOCR	R7Q325	R7Q4Z1	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	40S ribosomal protein S11.	0.998
R7Q325_CHOCR	R7Q5Q8_CHOCR	R7Q325	R7Q5Q8	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.965
R7Q325_CHOCR	R7Q674_CHOCR	R7Q325	R7Q674	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
R7Q325_CHOCR	R7Q689_CHOCR	R7Q325	R7Q689	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L37; Binds to the 23S rRNA.	0.996
R7Q325_CHOCR	R7Q697_CHOCR	R7Q325	R7Q697	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.998
R7Q325_CHOCR	R7Q6A7_CHOCR	R7Q325	R7Q6A7	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein.	0.826
R7Q325_CHOCR	R7Q6M6_CHOCR	R7Q325	R7Q6M6	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.998
R7Q325_CHOCR	R7Q712_CHOCR	R7Q325	R7Q712	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
R7Q325_CHOCR	R7Q7A5_CHOCR	R7Q325	R7Q7A5	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	S10_plectin domain-containing protein.	0.997
R7Q325_CHOCR	R7Q7E4_CHOCR	R7Q325	R7Q7E4	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.998
R7Q325_CHOCR	R7Q7L5_CHOCR	R7Q325	R7Q7L5	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.998
R7Q325_CHOCR	R7Q7R1_CHOCR	R7Q325	R7Q7R1	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S9 family protein; Belongs to the universal ribosomal protein uS9 family.	0.853
R7Q325_CHOCR	R7Q7S1_CHOCR	R7Q325	R7Q7S1	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.740
R7Q325_CHOCR	R7Q7T3_CHOCR	R7Q325	R7Q7T3	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999