STRINGSTRING
PEPE_0527 PEPE_0527 PEPE_1578 PEPE_1578 PEPE_1579 PEPE_1579 PEPE_1580 PEPE_1580 PEPE_1581 PEPE_1581 PEPE_1677 PEPE_1677 PEPE_1678 PEPE_1678 PEPE_1679 PEPE_1679 PEPE_1680 PEPE_1680 PEPE_1681 PEPE_1681 PEPE_1733 PEPE_1733 PEPE_1734 PEPE_1734 PEPE_1735 PEPE_1735 PEPE_1736 PEPE_1736 PEPE_1737 PEPE_1737 PEPE_1738 PEPE_1738 PEPE_1739 PEPE_1739
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PEPE_0527Transcriptional regulator. (94 aa)
PEPE_1578Hypothetical protein. (175 aa)
PEPE_1579Hypothetical protein. (176 aa)
PEPE_1580Na+-driven multidrug efflux pump. (446 aa)
PEPE_1581Predicted metal-dependent membrane protease. (219 aa)
PEPE_1677Spermine/spermidine N-acetyltransferase. (171 aa)
PEPE_1678Transcriptional regulator, MarR family. (150 aa)
PEPE_1679Transcriptional regulator, TetR family. (211 aa)
PEPE_1680ABC-type multidrug transport system, permease component. (380 aa)
PEPE_1681ABC-type multidrug transport system, ATPase component. (240 aa)
PEPE_1733DNA-binding response regulator (Rec-wHTH domains). (191 aa)
PEPE_1734Signal transduction histidine kinase. (371 aa)
PEPE_1735ABC-type multidrug transport system, permease component. (249 aa)
PEPE_1736ABC-type multidrug transport system, ATPase component. (296 aa)
PEPE_1737Uncharacterized membrane-associated protein. (205 aa)
PEPE_1738Hypothetical protein. (69 aa)
PEPE_1739Predicted membrane protein. (242 aa)
Your Current Organism:
Pediococcus pentosaceus
NCBI taxonomy Id: 278197
Other names: P. pentosaceus ATCC 25745, Pediococcus pentosaceus ATCC 25745, Pediococcus pentosaceus str. ATCC 25745, Pediococcus pentosaceus strain ATCC 25745
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