STRINGSTRING
PEPE_0026 PEPE_0026 PEPE_0073 PEPE_0073 PEPE_0153 PEPE_0153 PEPE_0201 PEPE_0201 fumC fumC PEPE_0210 PEPE_0210 PEPE_0218 PEPE_0218 PEPE_0244 PEPE_0244 PEPE_0246 PEPE_0246 prs prs PEPE_0309 PEPE_0309 PEPE_0318 PEPE_0318 ackA ackA PEPE_0337 PEPE_0337 PEPE_0353 PEPE_0353 PEPE_0405 PEPE_0405 PEPE_0406 PEPE_0406 gpsA gpsA PEPE_0459 PEPE_0459 pgk pgk tpiA tpiA eno eno PEPE_0528 PEPE_0528 PEPE_0602 PEPE_0602 PEPE_0639 PEPE_0639 PEPE_0713 PEPE_0713 acyP acyP PEPE_0834 PEPE_0834 plsX plsX acpP acpP fabZ fabZ fabH fabH acpP-2 acpP-2 PEPE_0857 PEPE_0857 PEPE_0858 PEPE_0858 PEPE_0859 PEPE_0859 PEPE_0860 PEPE_0860 PEPE_0861 PEPE_0861 PEPE_0862 PEPE_0862 accD accD PEPE_0864 PEPE_0864 PEPE_0865 PEPE_0865 PEPE_0866 PEPE_0866 PEPE_0867 PEPE_0867 PEPE_0873 PEPE_0873 PEPE_0876 PEPE_0876 PEPE_0898 PEPE_0898 PEPE_0899 PEPE_0899 PEPE_0900 PEPE_0900 PEPE_0901 PEPE_0901 PEPE_0902 PEPE_0902 PEPE_0903 PEPE_0903 PEPE_0955 PEPE_0955 plsY plsY PEPE_1092 PEPE_1092 pfkA pfkA prs-2 prs-2 PEPE_1177 PEPE_1177 PEPE_1198 PEPE_1198 rbsK rbsK PEPE_1252 PEPE_1252 zwf zwf PEPE_1280 PEPE_1280 pgi pgi PEPE_1352 PEPE_1352 PEPE_1360 PEPE_1360 PEPE_1361 PEPE_1361 PEPE_1362 PEPE_1362 PEPE_1363 PEPE_1363 PEPE_1367 PEPE_1367 rpiA rpiA gpmA gpmA fabH-2 fabH-2 ldh ldh acpS acpS PEPE_1615 PEPE_1615 PEPE_1616 PEPE_1616 PEPE_1617 PEPE_1617 PEPE_1618 PEPE_1618 PEPE_1697 PEPE_1697 rbsD rbsD rbsK-2 rbsK-2 PEPE_1700 PEPE_1700 mntH mntH gpmA-2 gpmA-2 PEPE_1769 PEPE_1769 PEPE_1770 PEPE_1770 PEPE_1771 PEPE_1771 PEPE_1772 PEPE_1772 PEPE_1773 PEPE_1773 PEPE_1774 PEPE_1774 PEPE_1821 PEPE_1821 ackA-2 ackA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PEPE_0026Short-chain alcohol dehydrogenase. (264 aa)
PEPE_0073Glucose 1-dehydrogenase. (261 aa)
PEPE_0153Glutathione reductase (NADPH); Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, related enzyme. (444 aa)
PEPE_0201Transcriptional regulator, LacI family. (331 aa)
fumCFumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (460 aa)
PEPE_0210Di- and tricarboxylate transporter. (472 aa)
PEPE_0218Malate dehydrogenase (NAD); Belongs to the LDH/MDH superfamily. (306 aa)
PEPE_0244Glutathione reductase (NADPH); Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, related enzyme. (444 aa)
PEPE_0246Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1141 aa)
prsPhosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (326 aa)
PEPE_0309Auxin efflux carrier (AEC) family permease. (311 aa)
PEPE_0318Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (462 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (399 aa)
PEPE_0337Phosphotransacetylase. (323 aa)
PEPE_0353Phosphoketolase. (787 aa)
PEPE_0405Acetolactate synthase, large subunit; Belongs to the TPP enzyme family. (558 aa)
PEPE_0406Alpha-acetolactate decarboxylase. (234 aa)
gpsAGlycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (338 aa)
PEPE_0459Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (340 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (400 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (440 aa)
PEPE_0528Probable pyridine nucleotide-disulfide oxidoreductase; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, related enzyme. (452 aa)
PEPE_0602Glycerol-3-phosphate cytidylyltransferase. (134 aa)
PEPE_0639Pyruvate oxidase; Belongs to the TPP enzyme family. (577 aa)
PEPE_07136-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (472 aa)
acyPAcylphosphatase. (90 aa)
PEPE_0834Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (215 aa)
plsXPhosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (347 aa)
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (80 aa)
fabZ3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (149 aa)
fabH3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (319 aa)
acpP-2Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (79 aa)
PEPE_0857[Acyl-carrier-protein] S-malonyltransferase. (310 aa)
PEPE_08583-oxoacyl-[acyl-carrier-protein] reductase. (242 aa)
PEPE_08593-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (408 aa)
PEPE_0860Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (146 aa)
PEPE_08613-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase. (137 aa)
PEPE_0862acetyl-CoA carboxylase carboxyltransferase subunit alpha. (455 aa)
accDacetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (276 aa)
PEPE_0864acetyl-CoA carboxylase carboxyltransferase subunit alpha. (255 aa)
PEPE_0865Enoyl-[acyl-carrier-protein] reductase (NADH). (252 aa)
PEPE_0866Hypothetical protein. (24 aa)
PEPE_0867Amino acid/polyamine/organocation transporter, APC superfamily; TC 2.A.3. (458 aa)
PEPE_08731-acyl-sn-glycerol-3-phosphate acyltransferase. (180 aa)
PEPE_0876D-lactate dehydrogenase, LdhA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (331 aa)
PEPE_0898Hypothetical protein. (75 aa)
PEPE_0899Tryptophan-rich sensory protein. (156 aa)
PEPE_0900Hypothetical protein. (56 aa)
PEPE_0901Predicted membrane protein. (160 aa)
PEPE_0902Hypothetical protein. (73 aa)
PEPE_0903Short-chain alcohol dehydrogenase. (246 aa)
PEPE_0955Glycerate kinase; Belongs to the glycerate kinase type-1 family. (379 aa)
plsYAcyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. (202 aa)
PEPE_1092Pyruvate kinase; Belongs to the pyruvate kinase family. (587 aa)
pfkA6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (322 aa)
prs-2Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (325 aa)
PEPE_1177NUDIX family hydrolase. (179 aa)
PEPE_11986-phosphogluconolactonase. (336 aa)
rbsKSugar kinase, ribokinase family; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (303 aa)
PEPE_1252Pyruvate oxidase; Belongs to the TPP enzyme family. (582 aa)
zwfGlucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (495 aa)
PEPE_12803-oxoacyl-acyl carrier protein reductase. (241 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (449 aa)
PEPE_1352Fructose-bisphosphate aldolase. (287 aa)
PEPE_1360Gluconate permease GntP; TC 2.A.8.1.1. (450 aa)
PEPE_1361Gluconate kinase, FGGY family; Belongs to the FGGY kinase family. (520 aa)
PEPE_13626-phosphogluconate dehydrogenase (decarboxylating). (299 aa)
PEPE_1363Transcriptional regulator. (277 aa)
PEPE_1367Diacylglycerol kinase. (333 aa)
rpiARibose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (228 aa)
gpmAPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (226 aa)
fabH-23-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (323 aa)
ldhL-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. (320 aa)
acpSPhosphopantetheinyl transferase (holo-ACP synthase); Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (118 aa)
PEPE_1615Uncharacterized conserved membrane protein. (581 aa)
PEPE_1616Malate permease. (323 aa)
PEPE_1617Malolactic enzyme. (542 aa)
PEPE_1618Malolactic fermentation system transcription activator; Belongs to the LysR transcriptional regulatory family. (295 aa)
PEPE_1697Ribose transport protein. (294 aa)
rbsDABC-type ribose transport system, auxiliary component; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (131 aa)
rbsK-2Sugar kinase, ribokinase family; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (302 aa)
PEPE_1700Transcriptional regulator, LacI family. (332 aa)
mntHMn2+ and Fe2+ transporter of the NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. (447 aa)
gpmA-2Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (229 aa)
PEPE_1769Hypothetical protein. (67 aa)
PEPE_1770Dihydrolipoamide dehydrogenase. (468 aa)
PEPE_1771Pyruvate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component. (429 aa)
PEPE_1772Pyruvate dehydrogenase (E1) component, beta subunit. (326 aa)
PEPE_1773Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit. (372 aa)
PEPE_1774Lipoate-protein ligase. (328 aa)
PEPE_1821NAD-dependent aldehyde dehydrogenase. (456 aa)
ackA-2Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (395 aa)
Your Current Organism:
Pediococcus pentosaceus
NCBI taxonomy Id: 278197
Other names: P. pentosaceus ATCC 25745, Pediococcus pentosaceus ATCC 25745, Pediococcus pentosaceus str. ATCC 25745, Pediococcus pentosaceus strain ATCC 25745
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