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PEPE_0745 | Integrase; Belongs to the 'phage' integrase family. (379 aa) | ||||
PEPE_0738 | Glutamine synthetase repressor. (121 aa) | ||||
greA | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (160 aa) | ||||
PEPE_0720 | Predicted transcriptional regulator. (110 aa) | ||||
PEPE_0714 | DNA-binding response regulator, OmpR family (Rec-wHTH domains). (228 aa) | ||||
PEPE_0696 | Response regulator of the LytR/AlgR family. (243 aa) | ||||
nrdR | Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. (157 aa) | ||||
mutM | DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (275 aa) | ||||
polA | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. (887 aa) | ||||
PEPE_0685 | DNA segregation ATPase FtsK/SpoIIIE related protein; Belongs to the FtsK/SpoIIIE/SftA family. (638 aa) | ||||
argR | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. (152 aa) | ||||
PEPE_0670 | CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. (223 aa) | ||||
PEPE_0549 | Transcriptional regulator, AraC family. (250 aa) | ||||
PEPE_0546 | Predicted transcriptional regulator. (155 aa) | ||||
PEPE_0540 | Integrase; Belongs to the 'phage' integrase family. (384 aa) | ||||
PEPE_0534 | Hypothetical protein. (400 aa) | ||||
PEPE_0531 | Type II restriction endonuclease, MutH family. (492 aa) | ||||
PEPE_0527 | Transcriptional regulator. (94 aa) | ||||
PEPE_0523 | Transposase. (83 aa) | ||||
PEPE_0520 | Transcriptional regulator, LacI family. (326 aa) | ||||
PEPE_0511 | Transcriptional regulator, AraC family. (276 aa) | ||||
PEPE_0497 | Site-specific recombinase, DNA invertase Pin related proteins. (186 aa) | ||||
PEPE_0492 | Transcriptional regulator, PadR family. (176 aa) | ||||
PEPE_0472 | DNA polymerase III, epsilon subunit related 3'-5' exonuclease. (178 aa) | ||||
PEPE_0457 | RNA polymerase, sigma 54 subunit, RpoN/SigL. (438 aa) | ||||
whiA | Hypothetical protein; Involved in cell division and chromosome segregation. (309 aa) | ||||
uvrA | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (947 aa) | ||||
uvrB | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (667 aa) | ||||
PEPE_0431 | DNA-binding response regulator, OmpR family (Rec-wHTH domains). (234 aa) | ||||
PEPE_0415 | Hypothetical protein. (218 aa) | ||||
PEPE_0414 | Transcriptional regulator, xre family. (104 aa) | ||||
PEPE_0408 | Crp-like transcriptional regulator. (227 aa) | ||||
PEPE_0404 | Superfamily I DNA and RNA helicase. (765 aa) | ||||
PEPE_0394 | Predicted transcriptional regulator. (237 aa) | ||||
PEPE_0362 | Transcriptional regulator, xre family. (140 aa) | ||||
PEPE_0352 | Transcriptional regulator, GntR family. (240 aa) | ||||
PEPE_0350 | BS_ykrK family protein. (176 aa) | ||||
PEPE_0327 | Transcriptional regulator, TetR family. (188 aa) | ||||
PEPE_0292 | Adenine/guanine phosphoribosyltransferase related PRPP-binding protein. (278 aa) | ||||
PEPE_0280 | Transcriptional regulator, GntR family. (231 aa) | ||||
PEPE_0272 | Transcriptional regulator. (170 aa) | ||||
PEPE_0261 | Transcriptional regulator, xre family. (274 aa) | ||||
PEPE_0255 | Superfamily I DNA and RNA helicase. (767 aa) | ||||
PEPE_0220 | Hypothetical protein. (339 aa) | ||||
PEPE_0201 | Transcriptional regulator, LacI family. (331 aa) | ||||
PEPE_0186 | Transcriptional regulator, MarR family. (383 aa) | ||||
PEPE_0176 | Transcriptional regulator, GntR family. (230 aa) | ||||
PEPE_0175 | Transcriptional regulator, GntR family. (245 aa) | ||||
PEPE_0154 | Transcriptional regulator, AraC family. (282 aa) | ||||
PEPE_0122 | Response regulator of the LytR/AlgR family. (149 aa) | ||||
PEPE_0119 | AraC-type DNA-binding transcriptional regulator. (242 aa) | ||||
PEPE_0114 | RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; Belongs to the sigma-70 factor family. (193 aa) | ||||
PEPE_0084 | Response regulator of the LytR/AlgR family. (248 aa) | ||||
PEPE_0060 | Transcriptional regulator, MerR family. (121 aa) | ||||
PEPE_0036 | BS_ykrK family protein. (152 aa) | ||||
PEPE_0020 | Transcriptional regulator, xre family. (190 aa) | ||||
PEPE_0017 | Transcriptional regulator. (167 aa) | ||||
PEPE_0012 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (465 aa) | ||||
PEPE_0008 | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. (175 aa) | ||||
gyrA | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (843 aa) | ||||
gyrB | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (648 aa) | ||||
recF | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (374 aa) | ||||
PEPE_0002 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (379 aa) | ||||
dnaA | DNA replication ATPase initiation; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (446 aa) | ||||
PEPE_1842 | Hypothetical protein; Belongs to the UPF0246 family. (251 aa) | ||||
rexB | DNA helicase/exodeoxyribonuclease V, subunit B; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' -> 3' nuclease activity; Belongs to the helicase family. AddB/RexB type 2 subfamily. (1192 aa) | ||||
addA | DNA helicase/exodeoxyribonuclease V, subunit A; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily. (1235 aa) | ||||
PEPE_1829 | Predicted transcriptional regulator. (64 aa) | ||||
PEPE_1828 | Hypothetical protein. (206 aa) | ||||
PEPE_1823 | Transcriptional regulator, PadR family. (106 aa) | ||||
PEPE_1809 | Transcriptional regulator, LacI family. (229 aa) | ||||
PEPE_1805 | Transcriptional regulator, GntR family. (240 aa) | ||||
PEPE_1797 | DNA-binding response regulator, OmpR family (Rec-wHTH domains). (233 aa) | ||||
PEPE_1782 | BS_ykrK family protein. (181 aa) | ||||
PEPE_1777 | Transcriptional regulator, GntR family. (237 aa) | ||||
PEPE_1756 | Transcriptional regulator, GntR family. (244 aa) | ||||
PEPE_1733 | DNA-binding response regulator (Rec-wHTH domains). (191 aa) | ||||
PEPE_1728 | Rad3-related DNA helicase. (783 aa) | ||||
PEPE_1723 | Chromosome segregation DNA-binding protein; Belongs to the ParB family. (283 aa) | ||||
PEPE_1717 | DNA-binding response regulator, OmpR family (Rec-wHTH domains). (229 aa) | ||||
PEPE_1707 | Site-specific recombinase, DNA invertase Pin related proteins. (186 aa) | ||||
PEPE_1706 | Hypothetical protein. (217 aa) | ||||
PEPE_1700 | Transcriptional regulator, LacI family. (332 aa) | ||||
PEPE_1695 | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. (217 aa) | ||||
PEPE_1679 | Transcriptional regulator, TetR family. (211 aa) | ||||
PEPE_1646 | Predicted transcriptional regulator. (150 aa) | ||||
PEPE_1632 | Rec (receiver) domain signal transduction protein. (281 aa) | ||||
PEPE_1613 | Exonuclease III. (251 aa) | ||||
ligA | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. (675 aa) | ||||
PEPE_1599 | Transcriptional regulator, AraC family. (384 aa) | ||||
PEPE_1594 | Predicted transcriptional regulator. (152 aa) | ||||
PEPE_1557 | Toxin-antitoxin addiction module toxin component MazF (an endoRNAse); Toxic component of a type II toxin-antitoxin (TA) system. (120 aa) | ||||
mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1165 aa) | ||||
PEPE_1527 | Transcriptional regulator, GntR family. (233 aa) | ||||
radA | DNA replication and repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (456 aa) | ||||
nusG | Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. (181 aa) | ||||
dnaX | DNA polymerase III, gamma/tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (581 aa) | ||||
PEPE_1483 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (104 aa) | ||||
recR | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa) | ||||
rex | AT-rich DNA-binding protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (208 aa) | ||||
PEPE_1428 | Transcriptional repressor of class III stress genes; Belongs to the CtsR family. (154 aa) | ||||
rpoB | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1202 aa) | ||||
rpoC | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1212 aa) | ||||
rpoA | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (314 aa) | ||||
PEPE_1384 | Transcriptional regulator, xre family. (68 aa) | ||||
PEPE_1379 | DNA or RNA helicase of superfamily II. (950 aa) | ||||
PEPE_1372 | ATP-dependent DNA helicase PcrA. (757 aa) | ||||
PEPE_1365 | Restriction endonuclease. (295 aa) | ||||
PEPE_1354 | DNA-binding response regulator, OmpR family (Rec-wHTH domains). (240 aa) | ||||
PEPE_1346 | Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters. (109 aa) | ||||
greA-2 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (154 aa) | ||||
PEPE_1338 | Transcriptional regulator, TetR family. (216 aa) | ||||
PEPE_1298 | Recombination protein MgsA. (425 aa) | ||||
PEPE_1279 | Xre-like DNA-binding protein. (289 aa) | ||||
recA | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (352 aa) | ||||
mutS | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (873 aa) | ||||
mutL | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (645 aa) | ||||
ruvA | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (195 aa) | ||||
ruvB | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (337 aa) | ||||
dinB | Nucleotidyltransferase/DNA polymerase for DNA repair; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (374 aa) | ||||
mutS2 | MutS family ATPase; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (785 aa) | ||||
PEPE_1250 | Transcriptional regulator, LacI family. (334 aa) | ||||
PEPE_1243 | Nucleotidyltransferase/DNA polymerase for DNA repair; Belongs to the DNA polymerase type-Y family. (429 aa) | ||||
PEPE_1240 | Hypothetical protein. (245 aa) | ||||
PEPE_1236 | Competence protein ComGC. (101 aa) | ||||
PEPE_1231 | Adenine-specific DNA methylase. (334 aa) | ||||
PEPE_1194 | DNA segregation ATPase FtsK/SpoIIIE related protein; Belongs to the FtsK/SpoIIIE/SftA family. (783 aa) | ||||
mraZ | Hypothetical protein, MraZ; Belongs to the MraZ family. (143 aa) | ||||
recD2 | ATP-dependent DNA helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. (814 aa) | ||||
PEPE_1161 | RNA binding protein, RRM domain. (71 aa) | ||||
PEPE_1151 | DNA uptake protein related DNA-binding protein. (235 aa) | ||||
PEPE_1148 | DNA polymerase III, delta subunit. (339 aa) | ||||
uvrC | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (594 aa) | ||||
nfo | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate. (296 aa) | ||||
dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (620 aa) | ||||
sigA | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (379 aa) | ||||
xerD | Tyrosine recombinase XerD subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (295 aa) | ||||
PEPE_1077 | Bacterial nucleoid protein Hbs; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (91 aa) | ||||
PEPE_1057 | Transcriptional regulator, AraC family. (298 aa) | ||||
PEPE_1050 | Transcriptional regulator. (281 aa) | ||||
PEPE_1038 | Integrase; Belongs to the 'phage' integrase family. (357 aa) | ||||
PEPE_1034 | Transcriptional regulator, xre family. (115 aa) | ||||
PEPE_1032 | Uncharacterized phage-encoded protein. (267 aa) | ||||
PEPE_1021 | Single-stranded DNA-binding protein. (132 aa) | ||||
PEPE_1019 | Hypothetical protein. (247 aa) | ||||
PEPE_0970 | Rossmann fold nucleotide-binding protein for DNA uptake. (286 aa) | ||||
PEPE_0969 | Transcriptional regulator, LacI family. (317 aa) | ||||
topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (690 aa) | ||||
xerC | Tyrosine recombinase XerC subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (301 aa) | ||||
parE | DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. (679 aa) | ||||
parC | DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily. (817 aa) | ||||
dinG | Rad3-related DNA helicase; 3'-5' exonuclease. (929 aa) | ||||
hrcA | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (346 aa) | ||||
polC | DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (1437 aa) | ||||
lexA | Transcriptional regulator, xre family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (209 aa) | ||||
smc | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1176 aa) | ||||
priA | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (806 aa) | ||||
rpoZ | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (69 aa) | ||||
PEPE_0823 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. (558 aa) | ||||
argR-2 | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. (152 aa) | ||||
PEPE_0810 | Transcriptional regulator, TetR family. (209 aa) | ||||
PEPE_0760 | Replicative DNA helicase. (415 aa) | ||||
PEPE_0759 | Hypothetical protein. (294 aa) | ||||
PEPE_0758 | Single-strand binding protein. (132 aa) | ||||
PEPE_0752 | Phage anti-repressor protein. (241 aa) | ||||
PEPE_0748 | Transcriptional regulator, xre family. (116 aa) |