STRINGSTRING
carB carB carA carA PEPE_1052 PEPE_1052 PEPE_0944 PEPE_0944 carA-2 carA-2 argR-2 argR-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
carBCarbamoyl-phosphate synthase large subunit. (1057 aa)
carACarbamoyl-phosphate synthase small subunit; Belongs to the CarA family. (361 aa)
PEPE_1052Acetyltransferase, GNAT family. (164 aa)
PEPE_0944Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. (818 aa)
carA-2Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. (359 aa)
argR-2Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. (152 aa)
Your Current Organism:
Pediococcus pentosaceus
NCBI taxonomy Id: 278197
Other names: P. pentosaceus ATCC 25745, Pediococcus pentosaceus ATCC 25745, Pediococcus pentosaceus str. ATCC 25745, Pediococcus pentosaceus strain ATCC 25745
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