STRINGSTRING
PEPE_1042 PEPE_1042 PEPE_1804 PEPE_1804 PEPE_1816 PEPE_1816 PEPE_0518 PEPE_0518 PEPE_0079 PEPE_0079
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PEPE_1042Sucrose PTS system EIIBCA or EIIBC component; TC 4.A.1; TC 4.A.1; TC 4.A.1. (659 aa)
PEPE_1804Beta-glucoside PTS system EIICBA component; TC 4.A.1; TC 4.A.1; TC 4.A.1. (657 aa)
PEPE_1816N-acetylglucosamine PTS system EIICBA or EIICB component; TC 4.A.1.1.2; TC 4.A.1.1.2; TC 4.A.1.1.2. (659 aa)
PEPE_0518Sucrose PTS system EIIBCA or EIIBC component; TC 4.A.1.2.12; TC 4.A.1.2.12; TC 4.A.1.2.12. (651 aa)
PEPE_0079PTS system IIB component, Glc family / PTS system IIC component, Glc family; TC 4.A.1; TC 4.A.1. (483 aa)
Your Current Organism:
Pediococcus pentosaceus
NCBI taxonomy Id: 278197
Other names: P. pentosaceus ATCC 25745, Pediococcus pentosaceus ATCC 25745, Pediococcus pentosaceus str. ATCC 25745, Pediococcus pentosaceus strain ATCC 25745
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