STRINGSTRING
PEPE_0142 PEPE_0142 PEPE_0281 PEPE_0281 PEPE_0578 PEPE_0578 PEPE_1164 PEPE_1164
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PEPE_0142Fructose PTS system EIIBC or EIIC component; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8. (629 aa)
PEPE_0281Cellobiose-specific PTS system IIB component. (103 aa)
PEPE_0578Cellobiose-specific PTS system IIB component. (101 aa)
PEPE_1164Fructose PTS system EIIBC or EIIC component; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4. (637 aa)
Your Current Organism:
Pediococcus pentosaceus
NCBI taxonomy Id: 278197
Other names: P. pentosaceus ATCC 25745, Pediococcus pentosaceus ATCC 25745, Pediococcus pentosaceus str. ATCC 25745, Pediococcus pentosaceus strain ATCC 25745
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.