(15 nodes) Exosome (RNase complex) network (Danaus plexippus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KGM_204797	3'-5' exoribonuclease CSL4 protein. (207 aa)
	KGM_215771	Superkiller viralicidic activity 2 2 isoform 1. (1036 aa)
	KGM_207169	PM-Scl autoantigen protein. (787 aa)
	KGM_208894	Mitotic control protein dis3; Belongs to the RNR ribonuclease family. (969 aa)
	KGM_205493	Uncharacterized protein. (144 aa)
	KGM_208730	Tr-type G domain-containing protein. (674 aa)
	KGM_213088	Exosome complex exonuclease RRP4. (299 aa)
	KGM_205619	Uncharacterized protein. (371 aa)
	KGM_212877	Exosome complex exonuclease RRP46. (205 aa)
	KGM_213951	Neutral lipase. (435 aa)
	KGM_202373	Exosome complex exonuclease RRP41. (251 aa)
	KGM_204548	mRNA transport regulator 3. (306 aa)
	KGM_206553	M-phase phosphoprotein 6. (118 aa)
	KGM_204886	Putative exosome complex exonuclease RRP44. (204 aa)
	KGM_201483	Exosc7 protein. (310 aa)

Your Current Organism:

Danaus plexippus

NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGM_201483	KGM_202373	A0A212FLM3	A0A212FEQ2	Exosc7 protein.	Exosome complex exonuclease RRP41.	0.998
KGM_201483	KGM_204548	A0A212FLM3	A0A212FFB0	Exosc7 protein.	mRNA transport regulator 3.	0.996
KGM_201483	KGM_204797	A0A212FLM3	A0A212EIQ7	Exosc7 protein.	3'-5' exoribonuclease CSL4 protein.	0.999
KGM_201483	KGM_204886	A0A212FLM3	A0A212FJ86	Exosc7 protein.	Putative exosome complex exonuclease RRP44.	0.978
KGM_201483	KGM_205493	A0A212FLM3	A0A212ETP3	Exosc7 protein.	Uncharacterized protein.	0.986
KGM_201483	KGM_205619	A0A212FLM3	A0A212F343	Exosc7 protein.	Uncharacterized protein.	0.998
KGM_201483	KGM_206553	A0A212FLM3	A0A212FH92	Exosc7 protein.	M-phase phosphoprotein 6.	0.980
KGM_201483	KGM_207169	A0A212FLM3	A0A212EMN4	Exosc7 protein.	PM-Scl autoantigen protein.	0.977
KGM_201483	KGM_208730	A0A212FLM3	A0A212EZV2	Exosc7 protein.	Tr-type G domain-containing protein.	0.986
KGM_201483	KGM_208894	A0A212FLM3	A0A212ESK5	Exosc7 protein.	Mitotic control protein dis3; Belongs to the RNR ribonuclease family.	0.979
KGM_201483	KGM_212877	A0A212FLM3	A0A212F6D2	Exosc7 protein.	Exosome complex exonuclease RRP46.	0.999
KGM_201483	KGM_213088	A0A212FLM3	A0A212F0U7	Exosc7 protein.	Exosome complex exonuclease RRP4.	0.999
KGM_201483	KGM_213951	A0A212FLM3	A0A212F757	Exosc7 protein.	Neutral lipase.	0.977
KGM_201483	KGM_215771	A0A212FLM3	A0A212ELK2	Exosc7 protein.	Superkiller viralicidic activity 2 2 isoform 1.	0.989
KGM_202373	KGM_201483	A0A212FEQ2	A0A212FLM3	Exosome complex exonuclease RRP41.	Exosc7 protein.	0.998
KGM_202373	KGM_204548	A0A212FEQ2	A0A212FFB0	Exosome complex exonuclease RRP41.	mRNA transport regulator 3.	0.997
KGM_202373	KGM_204797	A0A212FEQ2	A0A212EIQ7	Exosome complex exonuclease RRP41.	3'-5' exoribonuclease CSL4 protein.	0.998
KGM_202373	KGM_204886	A0A212FEQ2	A0A212FJ86	Exosome complex exonuclease RRP41.	Putative exosome complex exonuclease RRP44.	0.976
KGM_202373	KGM_205493	A0A212FEQ2	A0A212ETP3	Exosome complex exonuclease RRP41.	Uncharacterized protein.	0.985
KGM_202373	KGM_205619	A0A212FEQ2	A0A212F343	Exosome complex exonuclease RRP41.	Uncharacterized protein.	0.998