(8 nodes) Mixed, incl. Bap31/Bap29 transmembrane region, and Phosphofurin acidic cluster sorting protein 1 network (Danaus plexippus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KGM_205744	Uncharacterized protein. (135 aa)
	KGM_213065	Phorbol-ester/DAG-type domain-containing protein. (924 aa)
	KGM_200873	Uncharacterized protein. (222 aa)
	KGM_215404	Endoplasmic reticulum protein. (136 aa)
	KGM_211319	WD repeat-containing protein 37. (466 aa)
	KGM_214721	Uncharacterized protein. (44 aa)
	KGM_214722	Uncharacterized protein. (815 aa)
	KGM_214770	SMP-LTD domain-containing protein. (1119 aa)

Your Current Organism:

Danaus plexippus

NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGM_200873	KGM_215404	A0A212EZ42	A0A212EZA4	Uncharacterized protein.	Endoplasmic reticulum protein.	0.900
KGM_205744	KGM_211319	A0A212EHM8	A0A212F728	Uncharacterized protein.	WD repeat-containing protein 37.	0.835
KGM_211319	KGM_205744	A0A212F728	A0A212EHM8	WD repeat-containing protein 37.	Uncharacterized protein.	0.835
KGM_211319	KGM_214721	A0A212F728	A0A212F992	WD repeat-containing protein 37.	Uncharacterized protein.	0.720
KGM_211319	KGM_214722	A0A212F728	A0A212FHQ3	WD repeat-containing protein 37.	Uncharacterized protein.	0.835
KGM_213065	KGM_214770	A0A212EQZ9	A0A212FI41	Phorbol-ester/DAG-type domain-containing protein.	SMP-LTD domain-containing protein.	0.585
KGM_214721	KGM_211319	A0A212F992	A0A212F728	Uncharacterized protein.	WD repeat-containing protein 37.	0.720
KGM_214722	KGM_211319	A0A212FHQ3	A0A212F728	Uncharacterized protein.	WD repeat-containing protein 37.	0.835
KGM_214770	KGM_213065	A0A212FI41	A0A212EQZ9	SMP-LTD domain-containing protein.	Phorbol-ester/DAG-type domain-containing protein.	0.585
KGM_215404	KGM_200873	A0A212EZA4	A0A212EZ42	Endoplasmic reticulum protein.	Uncharacterized protein.	0.900