(13 nodes) Mixed, incl. Termination of RNA polymerase II transcription, and TRAMP complex network (Danaus plexippus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KGM_215723	CCHC-type domain-containing protein. (1150 aa)
	KGM_213608A	Helicase sen1. (951 aa)
	KGM_208639	Dom3Z like protein. (376 aa)
	KGM_215581	Uncharacterized protein. (1285 aa)
	KGM_200098	Uncharacterized protein. (119 aa)
	KGM_201056	Putative DNA-directed RNA polymerase; Belongs to the chorion protein family. (302 aa)
	KGM_212864	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (850 aa)
	KGM_208159	CID domain-containing protein. (887 aa)
	KGM_213608B	Helicase sen1. (328 aa)
	KGM_211008	Uncharacterized protein. (352 aa)
	KGM_203531	PAP-associated domain-containing protein 5. (564 aa)
	KGM_213717	CID domain-containing protein. (352 aa)
	KGM_213572	Uncharacterized protein. (262 aa)

Your Current Organism:

Danaus plexippus

NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGM_200098	KGM_203531	A0A212EXL8	A0A212FE62	Uncharacterized protein.	PAP-associated domain-containing protein 5.	0.574
KGM_200098	KGM_212864	A0A212EXL8	A0A212EYH4	Uncharacterized protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.409
KGM_200098	KGM_213608A	A0A212EXL8	A0A212EL25	Uncharacterized protein.	Helicase sen1.	0.685
KGM_200098	KGM_213608B	A0A212EXL8	A0A212F3Z3	Uncharacterized protein.	Helicase sen1.	0.685
KGM_201056	KGM_203531	A0A212EY37	A0A212FE62	Putative DNA-directed RNA polymerase; Belongs to the chorion protein family.	PAP-associated domain-containing protein 5.	0.574
KGM_201056	KGM_212864	A0A212EY37	A0A212EYH4	Putative DNA-directed RNA polymerase; Belongs to the chorion protein family.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.409
KGM_201056	KGM_213608A	A0A212EY37	A0A212EL25	Putative DNA-directed RNA polymerase; Belongs to the chorion protein family.	Helicase sen1.	0.685
KGM_201056	KGM_213608B	A0A212EY37	A0A212F3Z3	Putative DNA-directed RNA polymerase; Belongs to the chorion protein family.	Helicase sen1.	0.685
KGM_203531	KGM_200098	A0A212FE62	A0A212EXL8	PAP-associated domain-containing protein 5.	Uncharacterized protein.	0.574
KGM_203531	KGM_201056	A0A212FE62	A0A212EY37	PAP-associated domain-containing protein 5.	Putative DNA-directed RNA polymerase; Belongs to the chorion protein family.	0.574
KGM_203531	KGM_212864	A0A212FE62	A0A212EYH4	PAP-associated domain-containing protein 5.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.531
KGM_203531	KGM_215581	A0A212FE62	A0A212EXH8	PAP-associated domain-containing protein 5.	Uncharacterized protein.	0.883
KGM_203531	KGM_215723	A0A212FE62	A0A212EKW3	PAP-associated domain-containing protein 5.	CCHC-type domain-containing protein.	0.954
KGM_208159	KGM_208639	A0A212F1D3	A0A212EQS8	CID domain-containing protein.	Dom3Z like protein.	0.667
KGM_208159	KGM_211008	A0A212F1D3	A0A212F8B4	CID domain-containing protein.	Uncharacterized protein.	0.689
KGM_208159	KGM_212864	A0A212F1D3	A0A212EYH4	CID domain-containing protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.845
KGM_208159	KGM_213572	A0A212F1D3	A0A212FP89	CID domain-containing protein.	Uncharacterized protein.	0.689
KGM_208159	KGM_213717	A0A212F1D3	A0A212FIL2	CID domain-containing protein.	CID domain-containing protein.	0.726
KGM_208159	KGM_215581	A0A212F1D3	A0A212EXH8	CID domain-containing protein.	Uncharacterized protein.	0.426
KGM_208639	KGM_208159	A0A212EQS8	A0A212F1D3	Dom3Z like protein.	CID domain-containing protein.	0.667