(104 nodes) Cytoplasmic ribonucleoprotein granule, and Gene silencing by RNA network (Danaus plexippus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KGM_206053	Putative carbon catabolite repressor protein. (530 aa)
	KGM_201522	Double-stranded RNA-binding protein Staufen protein 2. (750 aa)
	KGM_201854	Enhancer of mRNA-decapping protein 4. (469 aa)
	KGM_205136	Zinc finger protein NANOS-P; Belongs to the nanos family. (347 aa)
	KGM_211222	Uncharacterized protein. (1435 aa)
	KGM_209755	Loquacious. (377 aa)
	KGM_214817	Mitochondrial cardiolipin hydrolase like protein. (246 aa)
	KGM_210332	Nudix hydrolase domain-containing protein. (154 aa)
	KGM_201677	Nanos-M; Belongs to the nanos family. (188 aa)
	KGM_201959B	PAT1 domain-containing protein. (468 aa)
	KGM_209893	Uncharacterized protein. (906 aa)
	KGM_215128	RING finger protein 17. (1997 aa)
	KGM_207908B	Adenosine deaminase. (163 aa)
	KGM_206000	Uncharacterized protein. (474 aa)
	KGM_203622	Putative limkain b1. (1235 aa)
	KGM_204116	Cytoplasmic polyadenylation element-binding protein 1. (432 aa)
	KGM_204117	Eukaryotic initiation factor 4E-2; Belongs to the eukaryotic initiation factor 4E family. (240 aa)
	KGM_207159	Protein kinase domain-containing protein. (656 aa)
	KGM_209191	Dicer-2; Belongs to the helicase family. Dicer subfamily. (1536 aa)
	KGM_209192	Dicer-2. (415 aa)
	KGM_210043B	5'-3' exoribonuclease 1 isoform 1. (610 aa)
	KGM_210704	Uncharacterized protein. (526 aa)
	KGM_210707	CCR4-NOT transcription complex subunit 6 like protein. (417 aa)
	KGM_210703	CCR4-NOT transcription complex subunit 6 like protein. (219 aa)
	KGM_208738	Putative pumilio. (197 aa)
	KGM_208737	Pumilio. (256 aa)
	KGM_208734	Pumilio protein 2. (601 aa)
	KGM_208739	Pumilio. (366 aa)
	KGM_201958	Uncharacterized protein. (1000 aa)
	KGM_213226	Uncharacterized protein. (414 aa)
	KGM_200325	Uncharacterized protein. (692 aa)
	KGM_213701	Putative ATP-dependent RNA helicase me31b like protein; Belongs to the DEAD box helicase family. (440 aa)
	KGM_214284	Peptidylprolyl isomerase. (424 aa)
	KGM_203403	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. (895 aa)
	KGM_205725	5'-3' exoribonuclease 1 isoform 1. (766 aa)
	KGM_213152	Uncharacterized protein. (369 aa)
	KGM_200944	Cell differentiation protein RCD1. (300 aa)
	KGM_207884	Uncharacterized protein. (232 aa)
	KGM_214209	Putative 2-phosphodiesterase. (399 aa)
	KGM_215962	R2D2 protein. (217 aa)
	KGM_206326B	NFX1-type zinc finger-containing protein 1. (897 aa)
	KGM_208430B	AGO3 protein. (547 aa)
	KGM_213063	Uncharacterized protein. (1393 aa)
	KGM_213062	Uncharacterized protein. (587 aa)
	KGM_209940	Uncharacterized protein. (1187 aa)
	KGM_215986	Ccr4-associated factor. (288 aa)
	KGM_215987	Ccr4-associated factor. (299 aa)
	KGM_200520	Nanos protein; Belongs to the nanos family. (296 aa)
	KGM_200311	Trinucleotide repeat-containing protein 6A. (1088 aa)
	KGM_215610	Argonaute 1; Belongs to the argonaute family. (909 aa)
	KGM_212722	Uncharacterized protein. (510 aa)
	KGM_212752	Putative double-stranded binding protein. (746 aa)
	KGM_210509	DFDF domain-containing protein. (480 aa)
	KGM_204187	Uncharacterized protein. (1246 aa)
	KGM_212310	Endoribonuclease Dcr-1. (722 aa)
	KGM_207908A	Adenosine deaminase. (547 aa)
	KGM_210406	Uncharacterized protein. (146 aa)
	KGM_210409	Peptidylprolyl isomerase. (225 aa)
	KGM_213160	Mitochondrial cardiolipin hydrolase. (103 aa)
	KGM_201998B	Argonaute 2. (488 aa)
	KGM_206300	mRNA-decapping enzyme 1B. (426 aa)
	KGM_211320	Putative ATP-dependent RNA helicase spindle-E like protein. (1453 aa)
	KGM_212319	PLDc_2 domain-containing protein. (267 aa)
	KGM_212149	Poly. (529 aa)
	KGM_214638	Putative helicase MOV-10. (904 aa)
	KGM_203979	Uncharacterized protein. (760 aa)
	KGM_205891	Uncharacterized protein. (249 aa)
	KGM_215416	Poly. (443 aa)
	KGM_211012	RING finger protein 17. (1714 aa)
	KGM_206644	Ribonuclease 3. (1440 aa)
	KGM_206634	Uncharacterized protein. (270 aa)
	KGM_215091	mRNA-decapping enzyme 2 isoform 1. (370 aa)
	KGM_210043A	5'-3' exoribonuclease 1 isoform 1. (729 aa)
	KGM_204606	Putative Cytoplasmic polyadenylation element binding protein. (399 aa)
	KGM_208462	Aubergine protein; Belongs to the argonaute family. (1021 aa)
	KGM_202362B	Exuperantia. (315 aa)
	KGM_208430A	AGO3 protein. (384 aa)
	KGM_207601	Putative thiamin pyrophosphokinase. (326 aa)
	KGM_200979	Nudix hydrolase 3. (218 aa)
	KGM_201683	Nanos protein; Belongs to the nanos family. (304 aa)
	KGM_202066	Putative adenosine deaminase acting on tRNA. (344 aa)
	KGM_201998A	Argonaute 2. (869 aa)
	KGM_211438	Nanos-O; Belongs to the nanos family. (281 aa)
	KGM_204933	USP domain-containing protein. (922 aa)
	KGM_200865	Uncharacterized protein. (752 aa)
	KGM_203675	Tudor domain-containing protein 7. (1085 aa)
	KGM_204712	Smaug protein 2. (560 aa)
	KGM_215732	Nudix hydrolase domain-containing protein. (360 aa)
	KGM_204689	CCR4-NOT transcription complex subunit 2. (397 aa)
	KGM_202111	Putative Tob1 protein. (252 aa)
	KGM_200357	Putative poly. (616 aa)
	KGM_209499	Bicaudal C. (831 aa)
	KGM_208376	CCR4-NOT transcription complex subunit 1 isoform 1. (2384 aa)
	KGM_212338	Putative translin associated factor X. (277 aa)
	KGM_215782	Uncharacterized protein. (1189 aa)
	KGM_207079	Putative eukaryotic translation initiation factor 4E nuclear import factor 1. (1026 aa)
	KGM_207463	ANK_REP_REGION domain-containing protein. (379 aa)
	KGM_206326A	NFX1-type zinc finger-containing protein 1. (101 aa)
	KGM_205660	Uncharacterized protein. (330 aa)
	KGM_212927	Putative rap55. (473 aa)
	KGM_212926	Maternal protein tudor. (2243 aa)
	KGM_212682B	PAB-dependent poly. (99 aa)
	KGM_212682A	PAB-dependent poly. (75 aa)
	KGM_210131	Putative ATP-dependent RNA helicase spindle-E like protein. (141 aa)

Your Current Organism:

Danaus plexippus

NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGM_200311	KGM_200865	A0A212F1R2	A0A212FIE5	Trinucleotide repeat-containing protein 6A.	Uncharacterized protein.	0.423
KGM_200311	KGM_201998A	A0A212F1R2	A0A212FGE2	Trinucleotide repeat-containing protein 6A.	Argonaute 2.	0.935
KGM_200311	KGM_201998B	A0A212F1R2	A0A212F6G0	Trinucleotide repeat-containing protein 6A.	Argonaute 2.	0.935
KGM_200311	KGM_204187	A0A212F1R2	A0A212F3M5	Trinucleotide repeat-containing protein 6A.	Uncharacterized protein.	0.422
KGM_200311	KGM_204689	A0A212F1R2	A0A212FKC7	Trinucleotide repeat-containing protein 6A.	CCR4-NOT transcription complex subunit 2.	0.566
KGM_200311	KGM_204933	A0A212F1R2	A0A212FIE1	Trinucleotide repeat-containing protein 6A.	USP domain-containing protein.	0.600
KGM_200311	KGM_207159	A0A212F1R2	A0A212EMS4	Trinucleotide repeat-containing protein 6A.	Protein kinase domain-containing protein.	0.859
KGM_200311	KGM_208376	A0A212F1R2	A0A212FKR2	Trinucleotide repeat-containing protein 6A.	CCR4-NOT transcription complex subunit 1 isoform 1.	0.891
KGM_200311	KGM_212682A	A0A212F1R2	A0A212FPT2	Trinucleotide repeat-containing protein 6A.	PAB-dependent poly.	0.600
KGM_200311	KGM_212682B	A0A212F1R2	A0A212FPM6	Trinucleotide repeat-containing protein 6A.	PAB-dependent poly.	0.600
KGM_200311	KGM_213701	A0A212F1R2	A0A212EQ68	Trinucleotide repeat-containing protein 6A.	Putative ATP-dependent RNA helicase me31b like protein; Belongs to the DEAD box helicase family.	0.552
KGM_200311	KGM_215610	A0A212F1R2	A0A212F1Y9	Trinucleotide repeat-containing protein 6A.	Argonaute 1; Belongs to the argonaute family.	0.986
KGM_200311	KGM_215986	A0A212F1R2	A0A212EZJ3	Trinucleotide repeat-containing protein 6A.	Ccr4-associated factor.	0.445
KGM_200311	KGM_215987	A0A212F1R2	A0A212EZJ4	Trinucleotide repeat-containing protein 6A.	Ccr4-associated factor.	0.445
KGM_200325	KGM_208430A	A0A212EPH0	A0A212FEY5	Uncharacterized protein.	AGO3 protein.	0.803
KGM_200325	KGM_208430B	A0A212EPH0	A0A212EYG1	Uncharacterized protein.	AGO3 protein.	0.803
KGM_200325	KGM_208462	A0A212EPH0	A0A212FEI4	Uncharacterized protein.	Aubergine protein; Belongs to the argonaute family.	0.721
KGM_200325	KGM_211012	A0A212EPH0	A0A212FBP6	Uncharacterized protein.	RING finger protein 17.	0.526
KGM_200325	KGM_212926	A0A212EPH0	A0A212FP82	Uncharacterized protein.	Maternal protein tudor.	0.435
KGM_200325	KGM_215128	A0A212EPH0	A0A212EKB0	Uncharacterized protein.	RING finger protein 17.	0.477