7 items (Danaus plexippus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KGM_213798	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (240 aa)
	KGM_205828	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (420 aa)
	KGM_202835	SpoU_methylase domain-containing protein. (1357 aa)
	KGM_215608	Putative RNA. (340 aa)
	KGM_205067	SAM-dependent MTase TRM10-type domain-containing protein. (300 aa)
	KGM_215074	tRNA (guanine(26)-N(2))-dimethyltransferase. (547 aa)
	KGM_204140	tRNA guanosine-2'-O-methyltransferase TRM11 protein isoform 2. (497 aa)

Your Current Organism:

Danaus plexippus

NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGM_202835	KGM_204140	A0A212EII6	A0A212F6U8	SpoU_methylase domain-containing protein.	tRNA guanosine-2'-O-methyltransferase TRM11 protein isoform 2.	0.451
KGM_202835	KGM_205067	A0A212EII6	A0A212EWG5	SpoU_methylase domain-containing protein.	SAM-dependent MTase TRM10-type domain-containing protein.	0.586
KGM_202835	KGM_205828	A0A212EII6	A0A212ES03	SpoU_methylase domain-containing protein.	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.	0.448
KGM_202835	KGM_213798	A0A212EII6	A0A212EUR2	SpoU_methylase domain-containing protein.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.	0.694
KGM_202835	KGM_215074	A0A212EII6	A0A212FCN3	SpoU_methylase domain-containing protein.	tRNA (guanine(26)-N(2))-dimethyltransferase.	0.655
KGM_202835	KGM_215608	A0A212EII6	A0A212F1X1	SpoU_methylase domain-containing protein.	Putative RNA.	0.461
KGM_204140	KGM_202835	A0A212F6U8	A0A212EII6	tRNA guanosine-2'-O-methyltransferase TRM11 protein isoform 2.	SpoU_methylase domain-containing protein.	0.451
KGM_204140	KGM_205067	A0A212F6U8	A0A212EWG5	tRNA guanosine-2'-O-methyltransferase TRM11 protein isoform 2.	SAM-dependent MTase TRM10-type domain-containing protein.	0.580
KGM_204140	KGM_205828	A0A212F6U8	A0A212ES03	tRNA guanosine-2'-O-methyltransferase TRM11 protein isoform 2.	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.	0.634
KGM_204140	KGM_213798	A0A212F6U8	A0A212EUR2	tRNA guanosine-2'-O-methyltransferase TRM11 protein isoform 2.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.	0.752
KGM_204140	KGM_215074	A0A212F6U8	A0A212FCN3	tRNA guanosine-2'-O-methyltransferase TRM11 protein isoform 2.	tRNA (guanine(26)-N(2))-dimethyltransferase.	0.757
KGM_204140	KGM_215608	A0A212F6U8	A0A212F1X1	tRNA guanosine-2'-O-methyltransferase TRM11 protein isoform 2.	Putative RNA.	0.580
KGM_205067	KGM_202835	A0A212EWG5	A0A212EII6	SAM-dependent MTase TRM10-type domain-containing protein.	SpoU_methylase domain-containing protein.	0.586
KGM_205067	KGM_204140	A0A212EWG5	A0A212F6U8	SAM-dependent MTase TRM10-type domain-containing protein.	tRNA guanosine-2'-O-methyltransferase TRM11 protein isoform 2.	0.580
KGM_205067	KGM_205828	A0A212EWG5	A0A212ES03	SAM-dependent MTase TRM10-type domain-containing protein.	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.	0.689
KGM_205067	KGM_213798	A0A212EWG5	A0A212EUR2	SAM-dependent MTase TRM10-type domain-containing protein.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.	0.875
KGM_205067	KGM_215074	A0A212EWG5	A0A212FCN3	SAM-dependent MTase TRM10-type domain-containing protein.	tRNA (guanine(26)-N(2))-dimethyltransferase.	0.615
KGM_205828	KGM_202835	A0A212ES03	A0A212EII6	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.	SpoU_methylase domain-containing protein.	0.448
KGM_205828	KGM_204140	A0A212ES03	A0A212F6U8	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.	tRNA guanosine-2'-O-methyltransferase TRM11 protein isoform 2.	0.634
KGM_205828	KGM_205067	A0A212ES03	A0A212EWG5	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.	SAM-dependent MTase TRM10-type domain-containing protein.	0.689