(122 nodes) Secretory vesicle network (Danaus plexippus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KGM_206139	Uncharacterized protein. (1759 aa)
	KGM_201871	Uncharacterized protein. (246 aa)
	KGM_215479A	DOMON domain-containing protein. (530 aa)
	KGM_204827	Uncharacterized protein. (897 aa)
	KGM_204826	Uncharacterized protein. (1873 aa)
	KGM_212991	Fucosidase_C domain-containing protein. (174 aa)
	KGM_212990	Uncharacterized protein. (280 aa)
	KGM_208318	Ras-related GTP-binding protein Rab11. (213 aa)
	KGM_212557	Uncharacterized protein. (186 aa)
	KGM_212558	Hippocalcin. (190 aa)
	KGM_207724	Tyramine beta hydroxylase. (679 aa)
	KGM_202070	Ras-related protein Rab-8A. (204 aa)
	KGM_214856	Putative Phosphatidylinositol-binding clathrin assembly protein LAP. (64 aa)
	KGM_203021	Otoferlin. (1687 aa)
	KGM_203020	Otoferlin like protein. (406 aa)
	KGM_205541	Uncharacterized protein. (273 aa)
	KGM_206799	Putative Pep12p; Belongs to the syntaxin family. (258 aa)
	KGM_206795	Syntaxin 6. (143 aa)
	KGM_206794	Syntaxin 6. (82 aa)
	KGM_202287	Testis-specific serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (344 aa)
	KGM_207470	Synaptobrevin isoform 1. (123 aa)
	KGM_204224	Putative synaptotagmin. (1014 aa)
	KGM_207251	Multiple C2 and transmembrane domain-containing protein 1. (726 aa)
	KGM_207380	Guanylate kinase-like domain-containing protein. (465 aa)
	KGM_209169	Uncharacterized protein. (1271 aa)
	KGM_203340	Chloride channel protein. (645 aa)
	KGM_210956A	Uncharacterized protein. (831 aa)
	KGM_213055	Putative ras-related protein Rab-9. (143 aa)
	KGM_213638	Calcium-dependent secretion activator. (1108 aa)
	KGM_213637	Calcium-dependent secretion activator. (315 aa)
	KGM_208898	Proton-associated sugar transporter A like protein. (598 aa)
	KGM_211917	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (248 aa)
	KGM_214213	60A protein. (376 aa)
	KGM_210794	Synaptogyrin. (226 aa)
	KGM_204358	ATP-binding cassette sub-family G member 4. (756 aa)
	KGM_202972	Synaptotagmin-7 like protein. (181 aa)
	KGM_201951	Uncharacterized protein. (174 aa)
	KGM_214540	Uncharacterized protein. (259 aa)
	KGM_208578	Vesicular glutamate transporter 1. (594 aa)
	KGM_203567	Calcineurin B. (182 aa)
	KGM_203504	Putative clathrin coat assembly protein; Belongs to the Stoned B family. (1048 aa)
	KGM_203503	Putative stoned-A. (772 aa)
	KGM_204736	Putative serine protease inhibitor dipetalogastin. (884 aa)
	KGM_200719	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (443 aa)
	KGM_211775	Putative cAMP-dependent protein kinase catalytic subunit; Belongs to the protein kinase superfamily. (344 aa)
	KGM_206581	Kinase C alpha binding protein. (579 aa)
	KGM_202556	Dysbindin like protein. (254 aa)
	KGM_212130	Coiled-coil domain-containing protein 108. (1112 aa)
	KGM_208825	Uncharacterized protein. (851 aa)
	KGM_208826	Uncharacterized protein. (901 aa)
	KGM_201261	Synaptotagmin protein 5. (1977 aa)
	KGM_215395B	Secretory carrier-associated membrane protein. (89 aa)
	KGM_207859A	5-azacytidine-induced protein 1. (1045 aa)
	KGM_201873B	M-phase phosphoprotein 1. (143 aa)
	KGM_205176	Putative Synaptotagmin-6. (519 aa)
	KGM_210420	Uncharacterized protein. (146 aa)
	KGM_200940	Putative synaptobrevin. (174 aa)
	KGM_207958	Synapsin like protein. (646 aa)
	KGM_214624	Spastin; ATP-dependent microtubule severing protein. Microtubule severing may promote reorganization of cellular microtubule arrays and the release of microtubules from the microtubule organizing center following nucleation; Belongs to the AAA ATPase family. Spastin subfamily. (582 aa)
	KGM_205726	Neuroendocrine protein 7b2. (238 aa)
	KGM_216050	Uncharacterized protein. (169 aa)
	KGM_212015	N-synaptobrevin. (116 aa)
	KGM_206423	Hyaluronidase. (637 aa)
	KGM_206424	Hyaluronidase. (971 aa)
	KGM_205013	Dopamine receptor; Belongs to the G-protein coupled receptor 1 family. (431 aa)
	KGM_215395A	Secretory carrier-associated membrane protein. (249 aa)
	KGM_204824	Uncharacterized protein. (152 aa)
	KGM_204823	Uncharacterized protein. (944 aa)
	KGM_204822	Putative unc-13. (176 aa)
	KGM_204821	Putative unc-13. (58 aa)
	KGM_211535	Multiple C2 and transmembrane domain-containing protein 2. (803 aa)
	KGM_211534	Multiple C2 and transmembrane domain-containing protein 2. (200 aa)
	KGM_208556	Putative Rab3 GTPase-activating protein non-catalytic subunit. (1325 aa)
	KGM_215503	Putative synaptotagmin X. (488 aa)
	KGM_207452	UDENN domain-containing protein. (1868 aa)
	KGM_207276	Sperm-associated antigen 6 like protein. (532 aa)
	KGM_208221	Neuroparsin. (84 aa)
	KGM_213054	Putative ras-related protein Rab-9. (228 aa)
	KGM_208658	Multiple C2 and transmembrane domain-containing protein 1. (524 aa)
	KGM_208643	Multiple C2 and transmembrane domain-containing protein 1. (279 aa)
	KGM_200163	AP-1 complex subunit gamma. (696 aa)
	KGM_209303	Putative synaptic vesicular amine transporter. (201 aa)
	KGM_209304	Synaptic vesicular amine transporter. (201 aa)
	KGM_205420	Putative Synaptotagmin-4. (433 aa)
	KGM_210956B	Uncharacterized protein. (376 aa)
	KGM_203932	Enkurin domain-containing protein. (254 aa)
	KGM_205890	Rab40. (289 aa)
	KGM_202973	Synaptotagmin-7 like protein. (293 aa)
	KGM_206976	Uncharacterized protein. (618 aa)
	KGM_213076	Putative ROP; Belongs to the STXBP/unc-18/SEC1 family. (617 aa)
	KGM_211281	Ras-related protein Rab-27A. (209 aa)
	KGM_212132B	Putative receptor-type tyrosine-protein phosphatase N2. (1078 aa)
	KGM_215479B	DOMON domain-containing protein. (583 aa)
	KGM_208222	Neuroparsin. (78 aa)
	KGM_205889A	Rab40. (219 aa)
	KGM_210330	Xylose isomerase. (487 aa)
	KGM_210470	DC_STAMP domain-containing protein. (680 aa)
	KGM_209377	7,8-dihydro-8-oxoguanine triphosphatase like protein. (175 aa)
	KGM_211091	Zinc transporter. (231 aa)
	KGM_200728	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (521 aa)
	KGM_205796	Synaptotagmin I. (428 aa)
	KGM_210621	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (152 aa)
	KGM_203345	Putative GTP-binding protein. (666 aa)
	KGM_204726	Uncharacterized protein. (687 aa)
	KGM_203215	Uncharacterized protein. (105 aa)
	KGM_207796B	Putative Septin-4; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (364 aa)
	KGM_214491B	Inositol 1,4,5-trisphosphate receptor. (2580 aa)
	KGM_207825	Sec1 family domain-containing protein 2; Belongs to the STXBP/unc-18/SEC1 family. (622 aa)
	KGM_215029	MFS domain-containing protein. (447 aa)
	KGM_214949	Small GTP binding protein RAB8. (209 aa)
	KGM_212348	Small GTP-binding protein Rab10. (206 aa)
	KGM_206928	Putative ras-related protein Rab. (201 aa)
	KGM_207010	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1695 aa)
	KGM_207024	Septin; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (374 aa)
	KGM_206843	Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. (553 aa)
	KGM_210148	AP-1 complex subunit gamma-1. (109 aa)
	KGM_211064	Uncharacterized protein. (46 aa)
	KGM_208642	C2 domain-containing protein. (132 aa)
	KGM_205664	Testis-specific serine/threonine-protein kinase 1; Belongs to the protein kinase superfamily. (362 aa)
	KGM_205663	Testis-specific serine/threonine-protein kinase 1. (684 aa)
	KGM_212231	Integral membrane protein GPR177. (479 aa)
	KGM_213488	Amino acid transporter. (506 aa)

Your Current Organism:

Danaus plexippus

NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGM_200163	KGM_200940	A0A212F788	A0A212EZG6	AP-1 complex subunit gamma.	Putative synaptobrevin.	0.458
KGM_200163	KGM_203504	A0A212F788	A0A212EWQ6	AP-1 complex subunit gamma.	Putative clathrin coat assembly protein; Belongs to the Stoned B family.	0.589
KGM_200163	KGM_206423	A0A212F788	A0A212F1S1	AP-1 complex subunit gamma.	Hyaluronidase.	0.620
KGM_200163	KGM_206424	A0A212F788	A0A212F1U4	AP-1 complex subunit gamma.	Hyaluronidase.	0.620
KGM_200163	KGM_207010	A0A212F788	A0A212FMF4	AP-1 complex subunit gamma.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.957
KGM_200163	KGM_207470	A0A212F788	A0A212ENZ2	AP-1 complex subunit gamma.	Synaptobrevin isoform 1.	0.458
KGM_200163	KGM_208318	A0A212F788	A0A212EI71	AP-1 complex subunit gamma.	Ras-related GTP-binding protein Rab11.	0.577
KGM_200163	KGM_210148	A0A212F788	A0A212FN75	AP-1 complex subunit gamma.	AP-1 complex subunit gamma-1.	0.921
KGM_200163	KGM_210420	A0A212F788	A0A212EZG3	AP-1 complex subunit gamma.	Uncharacterized protein.	0.615
KGM_200163	KGM_211917	A0A212F788	A0A212ETN4	AP-1 complex subunit gamma.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.831
KGM_200163	KGM_212015	A0A212F788	A0A212F133	AP-1 complex subunit gamma.	N-synaptobrevin.	0.458
KGM_200163	KGM_214856	A0A212F788	A0A212EK41	AP-1 complex subunit gamma.	Putative Phosphatidylinositol-binding clathrin assembly protein LAP.	0.684
KGM_200719	KGM_200728	A0A212EX23	A0A212FFT1	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	0.684
KGM_200719	KGM_202070	A0A212EX23	A0A212EIN4	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Ras-related protein Rab-8A.	0.954
KGM_200719	KGM_205889A	A0A212EX23	A0A212FDL8	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Rab40.	0.716
KGM_200719	KGM_205890	A0A212EX23	A0A212FB49	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Rab40.	0.716
KGM_200719	KGM_206423	A0A212EX23	A0A212F1S1	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Hyaluronidase.	0.446
KGM_200719	KGM_206424	A0A212EX23	A0A212F1U4	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Hyaluronidase.	0.446
KGM_200719	KGM_206928	A0A212EX23	A0A212FMD5	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Putative ras-related protein Rab.	0.820
KGM_200719	KGM_207452	A0A212EX23	A0A212F4G3	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	UDENN domain-containing protein.	0.647