(14 nodes) GTP binding domain network (Danaus plexippus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KGM_212311B	Putative mmr1/hsr1 GTP binding protein. (475 aa)
	KGM_214079A	GTP-binding protein 128up. (333 aa)
	KGM_215342	G domain-containing protein. (701 aa)
	KGM_210045	Guanine nucleotide-binding protein 3. (572 aa)
	KGM_214560A	Putative Nucleolar GTP-binding protein. (468 aa)
	KGM_200792	GTP-binding protein 5. (364 aa)
	KGM_215923	G domain-containing protein. (349 aa)
	KGM_214811	Large subunit GTPase 1 protein. (872 aa)
	KGM_213540	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (950 aa)
	KGM_210815	Developmentally-regulated GTP-binding protein 2. (364 aa)
	KGM_213027	GTP binding protein. (240 aa)
	KGM_213028	GTPase. (1452 aa)
	KGM_212812	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (305 aa)
	KGM_205949	GTP-binding protein 10. (386 aa)

Your Current Organism:

Danaus plexippus

NCBI taxonomy Id: 278856
Other names: D. plexippus plexippus, Danaus plexippus plexippus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGM_200792	KGM_212812	A0A212FH52	A0A212EZJ8	GTP-binding protein 5.	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.813
KGM_200792	KGM_213027	A0A212FH52	A0A212EUQ5	GTP-binding protein 5.	GTP binding protein.	0.428
KGM_200792	KGM_213028	A0A212FH52	A0A212EUR4	GTP-binding protein 5.	GTPase.	0.428
KGM_200792	KGM_215342	A0A212FH52	A0A212F5F9	GTP-binding protein 5.	G domain-containing protein.	0.590
KGM_200792	KGM_215923	A0A212FH52	A0A212FLX9	GTP-binding protein 5.	G domain-containing protein.	0.593
KGM_205949	KGM_212812	A0A212FNU4	A0A212EZJ8	GTP-binding protein 10.	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.609
KGM_205949	KGM_213027	A0A212FNU4	A0A212EUQ5	GTP-binding protein 10.	GTP binding protein.	0.428
KGM_205949	KGM_213028	A0A212FNU4	A0A212EUR4	GTP-binding protein 10.	GTPase.	0.542
KGM_205949	KGM_215923	A0A212FNU4	A0A212FLX9	GTP-binding protein 10.	G domain-containing protein.	0.593
KGM_210045	KGM_212311B	A0A212F6K4	A0A212EYQ1	Guanine nucleotide-binding protein 3.	Putative mmr1/hsr1 GTP binding protein.	0.907
KGM_210045	KGM_213540	A0A212F6K4	A0A212ENS7	Guanine nucleotide-binding protein 3.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.999
KGM_210045	KGM_214560A	A0A212F6K4	A0A212FAE1	Guanine nucleotide-binding protein 3.	Putative Nucleolar GTP-binding protein.	0.994
KGM_210045	KGM_214811	A0A212F6K4	A0A212EKA9	Guanine nucleotide-binding protein 3.	Large subunit GTPase 1 protein.	0.936
KGM_210045	KGM_215923	A0A212F6K4	A0A212FLX9	Guanine nucleotide-binding protein 3.	G domain-containing protein.	0.441
KGM_210815	KGM_214079A	A0A212ERW3	A0A212F4C8	Developmentally-regulated GTP-binding protein 2.	GTP-binding protein 128up.	0.590
KGM_212311B	KGM_210045	A0A212EYQ1	A0A212F6K4	Putative mmr1/hsr1 GTP binding protein.	Guanine nucleotide-binding protein 3.	0.907
KGM_212311B	KGM_212812	A0A212EYQ1	A0A212EZJ8	Putative mmr1/hsr1 GTP binding protein.	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.415
KGM_212311B	KGM_213540	A0A212EYQ1	A0A212ENS7	Putative mmr1/hsr1 GTP binding protein.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.836
KGM_212311B	KGM_214560A	A0A212EYQ1	A0A212FAE1	Putative mmr1/hsr1 GTP binding protein.	Putative Nucleolar GTP-binding protein.	0.882
KGM_212311B	KGM_215923	A0A212EYQ1	A0A212FLX9	Putative mmr1/hsr1 GTP binding protein.	G domain-containing protein.	0.441