Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BL01065 | eno | BL01065 | BL03468 | Phosphoenolpyruvate synthase; BL01065 similar to pps from Bacillus subtilis. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.728 |
| BL01065 | pgm | BL01065 | BL03467 | Phosphoenolpyruvate synthase; BL01065 similar to pps from Bacillus subtilis. | Phosphoglycerate mutase; Essential for rapid growth and for sporulation. Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate. | 0.478 |
| BL01993 | ackA | BL01993 | BL00419 | acetyl-CoA synthetase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.662 |
| BL01993 | acsA | BL01993 | BL00440 | acetyl-CoA synthetase. | acetyl-CoA synthetase. | 0.634 |
| BL01993 | pta | BL01993 | BL03905 | acetyl-CoA synthetase. | Phosphotransacetylase. | 0.609 |
| BL01993 | ytcI | BL01993 | BL00550 | acetyl-CoA synthetase. | AMP-dependent synthetase and ligase YtcI. | 0.655 |
| BL03435 | BL03733 | BL03435 | BL03733 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. | Putative phosphatase; Belongs to the phosphoglycerate mutase family. | 0.484 |
| BL03435 | eno | BL03435 | BL03468 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.402 |
| BL03435 | glyA | BL03435 | BL03991 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.473 |
| BL03435 | mdh | BL03435 | BL00397 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.409 |
| BL03435 | pgm | BL03435 | BL03467 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. | Phosphoglycerate mutase; Essential for rapid growth and for sporulation. Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate. | 0.567 |
| BL03435 | serA | BL03435 | BL00647 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. | Phosphoglycerate dehydrogenase SerA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.616 |
| BL03435 | serC | BL03435 | BL05093 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.961 |
| BL03435 | yhfR | BL03435 | BL01113 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. | Putative Phosphoglycerate/bisphosphoglycerate mutase YhfR; Belongs to the phosphoglycerate mutase family. | 0.484 |
| BL03733 | BL03435 | BL03733 | BL03435 | Putative phosphatase; Belongs to the phosphoglycerate mutase family. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. | 0.484 |
| BL03733 | eno | BL03733 | BL03468 | Putative phosphatase; Belongs to the phosphoglycerate mutase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.545 |
| BL03733 | glyA | BL03733 | BL03991 | Putative phosphatase; Belongs to the phosphoglycerate mutase family. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.570 |
| BL03733 | pfkA | BL03733 | BL00403 | Putative phosphatase; Belongs to the phosphoglycerate mutase family. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.586 |
| BL03733 | pgm | BL03733 | BL03467 | Putative phosphatase; Belongs to the phosphoglycerate mutase family. | Phosphoglycerate mutase; Essential for rapid growth and for sporulation. Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate. | 0.544 |
| BL03733 | serA | BL03733 | BL00647 | Putative phosphatase; Belongs to the phosphoglycerate mutase family. | Phosphoglycerate dehydrogenase SerA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.784 |
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