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LT85_0216 LT85_0216 lptB lptB uvrA uvrA LT85_0466 LT85_0466 LT85_0561 LT85_0561 LT85_0567 LT85_0567 ftsE ftsE dppD dppD potA potA LT85_0806 LT85_0806 msbA msbA LT85_1220 LT85_1220 dppD-2 dppD-2 xylG xylG proV proV macB macB proV-2 proV-2 lolD lolD ssuB ssuB cysA cysA rbsA rbsA LT85_1626 LT85_1626 livF livF livG livG hmuV hmuV LT85_1824 LT85_1824 LT85_1876 LT85_1876 dppD-3 dppD-3 dppF dppF LT85_1992 LT85_1992 pstB pstB LT85_2146 LT85_2146 ftsE-2 ftsE-2 LT85_2221 LT85_2221 LT85_2252 LT85_2252 LT85_2408 LT85_2408 LT85_2457 LT85_2457 yehX yehX hisP hisP LT85_2506 LT85_2506 macB-2 macB-2 tauB tauB LT85_2687 LT85_2687 attE attE livF-3 livF-3 oppF oppF oppB oppB ugpC ugpC modC modC LT85_3191 LT85_3191 metN metN msbA-2 msbA-2 proV-3 proV-3 LT85_3327 LT85_3327 msbA-3 msbA-3 hisP-2 hisP-2 LT85_3436 LT85_3436 araG araG LT85_3482 LT85_3482 livF-5 livF-5 livG-4 livG-4 ugpC-2 ugpC-2 tagH tagH znuC znuC LT85_3717 LT85_3717 livF-6 livF-6 lapB lapB LT85_4004 LT85_4004 LT85_4064 LT85_4064 metN-2 metN-2 potA-2 potA-2 LT85_4484 LT85_4484 LT85_4524 LT85_4524 gltL gltL msbA-4 msbA-4 oppF-2 oppF-2 oppD oppD livF-7 livF-7 LT85_4657 LT85_4657 rbsA-2 rbsA-2 phnC phnC LT85_4792 LT85_4792 LT85_4826 LT85_4826 potA-3 potA-3 livF-8 livF-8 LT85_4997 LT85_4997
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LT85_0216ABC transporter ATP-binding protein. (512 aa)
lptBLipopolysaccharide ABC transporter; ATP-binding protein LptB. (248 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (957 aa)
LT85_0466Type I secretion system ATPase; LssB family LapB. (684 aa)
LT85_0561Methionine ABC transporter ATP-binding protein. (274 aa)
LT85_0567ABC-type multidrug transport system; ATPase component. (317 aa)
ftsECell division transporter; ATP-binding protein FtsE. (234 aa)
dppDDipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily. (620 aa)
potAPutrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (361 aa)
LT85_0806Putative ABC transporter ATP-binding protein. (289 aa)
msbALipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (585 aa)
LT85_1220ATPase components of ABC transporters with duplicated ATPase domains. (635 aa)
dppD-2Dipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily. (572 aa)
xylGD-xylose transport ATP-binding protein XylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (526 aa)
proVL-proline glycine betaine ABC transport system permease protein ProV. (283 aa)
macBMacrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (669 aa)
proV-2L-proline glycine betaine ABC transport system permease protein ProV. (396 aa)
lolDLipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. (236 aa)
ssuBAlkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (278 aa)
cysASulfate and thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (359 aa)
rbsARibose ABC transport system; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (523 aa)
LT85_1626ABC-type sugar transport system; ATP-binding protein. (503 aa)
livFBranched-chain amino acid transport ATP-binding protein LivF. (245 aa)
livGBranched-chain amino acid transport ATP-binding protein LivG. (253 aa)
hmuVABC-type hemin transport system; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (271 aa)
LT85_1824ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component. (281 aa)
LT85_1876ABC transporter; ATP-binding protein. (312 aa)
dppD-3Dipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily. (345 aa)
dppFDipeptide transport ATP-binding protein DppF; Belongs to the ABC transporter superfamily. (334 aa)
LT85_1992Various polyols ABC transporter; ATP-binding component; Belongs to the ABC transporter superfamily. (373 aa)
pstBPhosphate transport ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (266 aa)
LT85_2146ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component. (282 aa)
ftsE-2Cell division transporter; ATP-binding protein FtsE. (239 aa)
LT85_2221ABC transporter; ATP-binding protein. (278 aa)
LT85_2252Branched-chain amino acid transport ATP-binding protein LivF. (231 aa)
LT85_2408ABC transporter multidrug efflux pump; Fused ATP-binding domains. (337 aa)
LT85_2457ABC-type multidrug transport system; ATPase component. (306 aa)
yehXOsmoprotectant ABC transporter ATP-binding subunit YehX. (310 aa)
hisPHistidine ABC transporter; ATP-binding protein HisP. (255 aa)
LT85_2506Methionine ABC transporter ATP-binding protein. (231 aa)
macB-2Macrolide export ATP-binding/permease protein MacB; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family. (704 aa)
tauBTaurine transport ATP-binding protein TauB; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. (265 aa)
LT85_2687Inositol transport system ATP-binding protein. (260 aa)
attEAttE component of AttEFGH ABC transport system. (219 aa)
livF-3Branched-chain amino acid transport ATP-binding protein LivF. (241 aa)
oppFOligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (318 aa)
oppBOligopeptide transport system permease protein OppB; Belongs to the ABC transporter superfamily. (331 aa)
ugpCGlycerol-3-phosphate ABC transporter; ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (363 aa)
modCMolybdenum transport ATP-binding protein ModC. (224 aa)
LT85_3191ABC transporter ATP-binding protein. (264 aa)
metNMethionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (353 aa)
msbA-2Lipid A export ATP-binding/permease protein MsbA. (566 aa)
proV-3L-proline glycine betaine ABC transport system permease protein ProV. (374 aa)
LT85_3327Glycerol-3-phosphate ABC transporter; ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (381 aa)
msbA-3Lipid A export ATP-binding/permease protein MsbA. (626 aa)
hisP-2Histidine ABC transporter; ATP-binding protein HisP. (242 aa)
LT85_3436Lipid A export ATP-binding/permease protein MsbA. (772 aa)
araGL-arabinose transport ATP-binding protein AraG. (512 aa)
LT85_3482Glutathione-regulated potassium-efflux system ATP-binding protein. (667 aa)
livF-5Branched-chain amino acid transport ATP-binding protein LivF. (240 aa)
livG-4Branched-chain amino acid transport ATP-binding protein LivG. (256 aa)
ugpC-2Glycerol-3-phosphate ABC transporter; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (359 aa)
tagHTeichoic acid export ATP-binding protein TagH. (418 aa)
znuCZinc ABC transporter; ATP-binding protein ZnuC. (212 aa)
LT85_3717Various polyols ABC transporter; ATP-binding component; Belongs to the ABC transporter superfamily. (382 aa)
livF-6Branched-chain amino acid transport ATP-binding protein LivF. (234 aa)
lapBType I secretion system ATPase; LssB family LapB. (710 aa)
LT85_4004ABC transporter related. (238 aa)
LT85_4064ABC transporter ATP-binding protein with unknown substrate. (257 aa)
metN-2Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (361 aa)
potA-2Putrescine transport ATP-binding protein PotA; Belongs to the ABC transporter superfamily. (353 aa)
LT85_4484ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component. (474 aa)
LT85_4524Nitrate ABC transporter; ATP-binding protein. (268 aa)
gltLGlutamate Aspartate transport ATP-binding protein GltL. (241 aa)
msbA-4Lipid A export ATP-binding/permease protein MsbA. (629 aa)
oppF-2Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (344 aa)
oppDOligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (329 aa)
livF-7Branched-chain amino acid transport ATP-binding protein LivF. (252 aa)
LT85_4657Ferric iron ABC transporter; ATP-binding protein; Belongs to the ABC transporter superfamily. (357 aa)
rbsA-2Ribose ABC transport system; ATP-binding protein RbsA. (536 aa)
phnCPhosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (282 aa)
LT85_4792Methionine ABC transporter ATP-binding protein. (257 aa)
LT85_4826ABC transporter; ATP-binding protein. (548 aa)
potA-3Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (382 aa)
livF-8Branched-chain amino acid transport ATP-binding protein LivF. (251 aa)
LT85_4997Nucleoside ABC transporter; Permease protein 1; Belongs to the ABC transporter superfamily. (361 aa)
Your Current Organism:
Collimonas arenae
NCBI taxonomy Id: 279058
Other names: C. arenae, CCUG 54727, Collimonas arenae Hoppener-Ogawa et al. 2008, Collimonas group A, Collimonas sp. CTO 282, Collimonas sp. NCCB 100025, Collimonas sp. NCCB 100026, Collimonas sp. NCCB 100031, Collimonas sp. Ter10, Collimonas sp. Ter146, Collimonas sp. Ter252, Collimonas sp. Ter282, LMG 23964, LMG:23964, NCCB 100031, strain Ter10
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