STRINGSTRING
Saro_0211 Saro_0211 Saro_1108 Saro_1108 Saro_1272 Saro_1272 Saro_1850 Saro_1850 gcvH gcvH gcvPA gcvPA Saro_1853 Saro_1853 Saro_2609 Saro_2609 Saro_3175 Saro_3175 Saro_3176 Saro_3176
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Saro_0211Glutamate dehydrogenase (NAD). (1573 aa)
Saro_1108L-glutamine synthetase. (469 aa)
Saro_1272Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (451 aa)
Saro_1850Aminomethyltransferase. (388 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (123 aa)
gcvPAGlycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (452 aa)
Saro_1853Glycine dehydrogenase (decarboxylating) beta subunit. (519 aa)
Saro_2609Glutamate--ammonia ligase; Belongs to the glutamine synthetase family. (441 aa)
Saro_3175Glutamate synthase (NADH) small subunit. (477 aa)
Saro_3176Glutamate synthase (NADH) large subunit. (1546 aa)
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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