STRINGSTRING
Saro_0031 Saro_0031 Saro_0036 Saro_0036 Saro_0297 Saro_0297 Saro_0303 Saro_0303 Saro_0386 Saro_0386 Saro_0387 Saro_0387 Saro_0441 Saro_0441 Saro_0442 Saro_0442 Saro_0491 Saro_0491 Saro_0845 Saro_0845 Saro_0852 Saro_0852 Saro_1106 Saro_1106 Saro_1154 Saro_1154 Saro_1231 Saro_1231 Saro_1287 Saro_1287 Saro_1403 Saro_1403 Saro_1421 Saro_1421 Saro_1430 Saro_1430 Saro_1435 Saro_1435 Saro_1446 Saro_1446 Saro_1499 Saro_1499 Saro_1510 Saro_1510 Saro_1511 Saro_1511 Saro_1577 Saro_1577 Saro_1578 Saro_1578 Saro_1599 Saro_1599 Saro_1600 Saro_1600 Saro_1614 Saro_1614 Saro_1615 Saro_1615 Saro_1616 Saro_1616 Saro_1631 Saro_1631 Saro_1632 Saro_1632 Saro_1664 Saro_1664 Saro_1665 Saro_1665 Saro_1764 Saro_1764 Saro_1774 Saro_1774 Saro_1775 Saro_1775 Saro_1842 Saro_1842 Saro_1924 Saro_1924 Saro_1926 Saro_1926 Saro_1927 Saro_1927 Saro_1928 Saro_1928 Saro_1929 Saro_1929 Saro_1930 Saro_1930 hfq hfq hflX hflX Saro_1983 Saro_1983 Saro_2034 Saro_2034 Saro_2065 Saro_2065 Saro_2066 Saro_2066 Saro_2067 Saro_2067 Saro_2068 Saro_2068 Saro_2275 Saro_2275 Saro_2281 Saro_2281 Saro_2326 Saro_2326 Saro_2361 Saro_2361 Saro_2437 Saro_2437 Saro_2481 Saro_2481 Saro_2618 Saro_2618 Saro_2619 Saro_2619 Saro_2658 Saro_2658 Saro_2666 Saro_2666 Saro_2771 Saro_2771 Saro_2906 Saro_2906 Saro_2907 Saro_2907 Saro_3050 Saro_3050 Saro_3074 Saro_3074 Saro_3108 Saro_3108
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Saro_0031Periplasmic sensor signal transduction histidine kinase. (450 aa)
Saro_0036Histidine kinase. (556 aa)
Saro_0297RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (498 aa)
Saro_0303Two component transcriptional regulator, winged helix family. (233 aa)
Saro_0386Two component transcriptional regulator, winged helix family. (229 aa)
Saro_0387Periplasmic sensor signal transduction histidine kinase. (502 aa)
Saro_0441Two component transcriptional regulator, winged helix family. (245 aa)
Saro_0442Periplasmic sensor signal transduction histidine kinase. (465 aa)
Saro_0491Response regulator receiver domain protein (CheY-like). (152 aa)
Saro_0845Metal dependent phosphohydrolase. (429 aa)
Saro_0852Methyl-accepting chemotaxis sensory transducer. (593 aa)
Saro_1106Periplasmic sensor diguanylate cyclase/phosphodiesterase. (764 aa)
Saro_1154DNA-binding protein Fis. (353 aa)
Saro_1231Transcriptional regulator, LuxR family. (223 aa)
Saro_1287Response regulator receiver domain protein (CheY-like). (127 aa)
Saro_1403Diguanylate cyclase/phosphodiesterase. (567 aa)
Saro_1421Diguanylate cyclase/phosphodiesterase. (724 aa)
Saro_1430Methyl-accepting chemotaxis sensory transducer. (481 aa)
Saro_1435Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (896 aa)
Saro_1446Multi-sensor hybrid histidine kinase. (811 aa)
Saro_1499Osmosensitive K+ channel histidine kinase-like protein. (428 aa)
Saro_1510Two component transcriptional regulator, winged helix family. (224 aa)
Saro_1511Periplasmic sensor signal transduction histidine kinase. (478 aa)
Saro_1577Multi-sensor signal transduction histidine kinase. (515 aa)
Saro_1578Two component transcriptional regulator, LuxR family. (207 aa)
Saro_1599Two component transcriptional regulator, winged helix family. (228 aa)
Saro_1600Periplasmic sensor signal transduction histidine kinase. (468 aa)
Saro_1614Two component transcriptional regulator, LuxR family. (221 aa)
Saro_1615PAS/PAC sensor signal transduction histidine kinase. (608 aa)
Saro_1616Two component transcriptional regulator, LuxR family. (218 aa)
Saro_1631Two component transcriptional regulator, winged helix family. (227 aa)
Saro_1632Periplasmic sensor signal transduction histidine kinase. (513 aa)
Saro_1664Histidine kinase. (530 aa)
Saro_1665Two component transcriptional regulator, LuxR family. (307 aa)
Saro_1764Putative integral membrane sensor protein. (313 aa)
Saro_1774Periplasmic sensor signal transduction histidine kinase. (483 aa)
Saro_1775Two component transcriptional regulator, winged helix family. (243 aa)
Saro_1842Two component, sigma54 specific, transcriptional regulator, Fis family. (472 aa)
Saro_1924Hypothetical protein. (189 aa)
Saro_1926tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (351 aa)
Saro_1927Signal transduction histidine kinase, nitrogen specific, NtrB. (373 aa)
Saro_1928Two component, sigma54 specific, transcriptional regulator, Fis family. (477 aa)
Saro_1929Periplasmic sensor signal transduction histidine kinase. (742 aa)
Saro_1930Two component, sigma54 specific, transcriptional regulator, Fis family. (461 aa)
hfqRNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (193 aa)
hflXSmall GTP-binding protein domain; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (426 aa)
Saro_1983Diguanylate cyclase/phosphodiesterase. (430 aa)
Saro_2034Histidine kinase. (458 aa)
Saro_2065Periplasmic sensor signal transduction histidine kinase. (467 aa)
Saro_2066Two component transcriptional regulator, winged helix family. (225 aa)
Saro_2067Conserved hypothetical protein. (99 aa)
Saro_2068ABC transporter related protein. (598 aa)
Saro_2275Histidine kinase. (394 aa)
Saro_2281Two component transcriptional regulator, winged helix family. (229 aa)
Saro_2326Diguanylate phosphodiesterase. (760 aa)
Saro_2361Flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (327 aa)
Saro_2437Two component transcriptional regulator, winged helix family. (224 aa)
Saro_2481Diguanylate cyclase. (374 aa)
Saro_2618Periplasmic sensor signal transduction histidine kinase. (436 aa)
Saro_2619Two component transcriptional regulator, winged helix family. (240 aa)
Saro_2658Diguanylate cyclase/phosphodiesterase. (641 aa)
Saro_2666Signal transduction histidine kinase. (446 aa)
Saro_2771Two component transcriptional regulator, LuxR family. (206 aa)
Saro_2906Periplasmic sensor signal transduction histidine kinase. (525 aa)
Saro_2907Two component transcriptional regulator, winged helix family. (250 aa)
Saro_3050Conserved hypothetical protein. (213 aa)
Saro_3074RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family. (244 aa)
Saro_3108Response regulator receiver protein. (122 aa)
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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