STRINGSTRING
Saro_1223 Saro_1223 Saro_1225 Saro_1225 Saro_1226 Saro_1226 Saro_2045 Saro_2045 Saro_2456 Saro_2456
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Saro_1223L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (409 aa)
Saro_1225Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (305 aa)
Saro_1226Transcriptional regulator, IclR family. (249 aa)
Saro_2045L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (355 aa)
Saro_2456L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (408 aa)
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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