STRINGSTRING
Saro_3283 Saro_3283 cobB cobB Saro_0031 Saro_0031 Saro_0036 Saro_0036 lipB lipB Saro_0117 Saro_0117 Saro_0187 Saro_0187 Saro_0189 Saro_0189 Saro_0228 Saro_0228 prmC prmC Saro_0336 Saro_0336 Saro_0373 Saro_0373 Saro_0387 Saro_0387 Saro_0442 Saro_0442 Saro_0491 Saro_0491 Saro_0647 Saro_0647 Saro_0674 Saro_0674 Saro_0837 Saro_0837 rimO rimO Saro_0879 Saro_0879 acpS acpS Saro_0940 Saro_0940 Saro_0966 Saro_0966 Saro_0986 Saro_0986 Saro_1047 Saro_1047 bpt bpt Saro_1106 Saro_1106 map map Saro_1237 Saro_1237 Saro_1306 Saro_1306 Saro_1350 Saro_1350 Saro_1382 Saro_1382 ccmE ccmE Saro_1395 Saro_1395 Saro_1403 Saro_1403 Saro_1446 Saro_1446 Saro_1448 Saro_1448 Saro_1499 Saro_1499 Saro_1511 Saro_1511 Saro_1577 Saro_1577 Saro_1600 Saro_1600 Saro_1606 Saro_1606 Saro_1615 Saro_1615 Saro_1632 Saro_1632 Saro_1664 Saro_1664 Saro_1742 Saro_1742 Saro_1747 Saro_1747 Saro_1774 Saro_1774 Saro_1804 Saro_1804 lipA lipA Saro_1927 Saro_1927 Saro_1929 Saro_1929 Saro_2002 Saro_2002 Saro_2034 Saro_2034 Saro_2048 Saro_2048 Saro_2065 Saro_2065 Saro_2251 Saro_2251 Saro_2275 Saro_2275 Saro_2282 Saro_2282 Saro_2326 Saro_2326 Saro_2346 Saro_2346 Saro_2486 Saro_2486 Saro_2618 Saro_2618 Saro_2627 Saro_2627 Saro_2664 Saro_2664 Saro_2756 Saro_2756 Saro_2786 Saro_2786 Saro_2794 Saro_2794 Saro_2905 Saro_2905 Saro_2906 Saro_2906 Saro_2971 Saro_2971 Saro_3050 Saro_3050 Saro_3119 Saro_3119 Saro_3224 Saro_3224 Saro_3243 Saro_3243 Saro_3244 Saro_3244 Saro_3247 Saro_3247
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Saro_3283Protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (208 aa)
cobBSilent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily. (239 aa)
Saro_0031Periplasmic sensor signal transduction histidine kinase. (450 aa)
Saro_0036Histidine kinase. (556 aa)
lipBLipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (222 aa)
Saro_0117Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation. (280 aa)
Saro_0187protein-L-isoaspartate(D-aspartate) O-methyltransferase. (197 aa)
Saro_0189Histidine kinase internal region. (642 aa)
Saro_0228Histidine kinase internal region. (381 aa)
prmC[protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (291 aa)
Saro_0336precorrin-6Y C5,15-methyltransferase (decarboxylating). (399 aa)
Saro_0373Filamentation induced by cAMP protein Fic. (371 aa)
Saro_0387Periplasmic sensor signal transduction histidine kinase. (502 aa)
Saro_0442Periplasmic sensor signal transduction histidine kinase. (465 aa)
Saro_0491Response regulator receiver domain protein (CheY-like). (152 aa)
Saro_0647Phage portal protein, HK97. (434 aa)
Saro_0674CoA-binding protein. (705 aa)
Saro_0837Peptidyl-prolyl cis-trans isomerase, cyclophilin type. (232 aa)
rimOSSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (471 aa)
Saro_0879LemA. (208 aa)
acpSHolo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (135 aa)
Saro_0940Protein of unknown function UPF0061. (469 aa)
Saro_0966Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (151 aa)
Saro_0986GCN5-related N-acetyltransferase. (157 aa)
Saro_1047Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (154 aa)
bptArginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. (284 aa)
Saro_1106Periplasmic sensor diguanylate cyclase/phosphodiesterase. (764 aa)
mapMethionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (283 aa)
Saro_1237Putative signal transduction histidine kinase. (547 aa)
Saro_1306GCN5-related N-acetyltransferase. (167 aa)
Saro_1350Histidine kinase A-like protein. (601 aa)
Saro_13822OG-Fe(II) oxygenase. (211 aa)
ccmECcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (156 aa)
Saro_1395Signal transduction histidine kinase. (304 aa)
Saro_1403Diguanylate cyclase/phosphodiesterase. (567 aa)
Saro_1446Multi-sensor hybrid histidine kinase. (811 aa)
Saro_1448Peptidyl-prolyl cis-trans isomerase. (330 aa)
Saro_1499Osmosensitive K+ channel histidine kinase-like protein. (428 aa)
Saro_1511Periplasmic sensor signal transduction histidine kinase. (478 aa)
Saro_1577Multi-sensor signal transduction histidine kinase. (515 aa)
Saro_1600Periplasmic sensor signal transduction histidine kinase. (468 aa)
Saro_1606Hypothetical protein. (338 aa)
Saro_1615PAS/PAC sensor signal transduction histidine kinase. (608 aa)
Saro_1632Periplasmic sensor signal transduction histidine kinase. (513 aa)
Saro_1664Histidine kinase. (530 aa)
Saro_1742[LSU ribosomal protein L11P]-lysine N-methyltransferase. (318 aa)
Saro_1747Hypothetical protein. (235 aa)
Saro_1774Periplasmic sensor signal transduction histidine kinase. (483 aa)
Saro_1804Hypothetical protein. (510 aa)
lipALipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (310 aa)
Saro_1927Signal transduction histidine kinase, nitrogen specific, NtrB. (373 aa)
Saro_1929Periplasmic sensor signal transduction histidine kinase. (742 aa)
Saro_2002PAS/PAC sensor signal transduction histidine kinase. (782 aa)
Saro_2034Histidine kinase. (458 aa)
Saro_2048Multi-sensor signal transduction histidine kinase. (711 aa)
Saro_2065Periplasmic sensor signal transduction histidine kinase. (467 aa)
Saro_2251Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (232 aa)
Saro_2275Histidine kinase. (394 aa)
Saro_2282Alg9-like mannosyltransferase. (494 aa)
Saro_2326Diguanylate phosphodiesterase. (760 aa)
Saro_2346Signal transduction histidine kinase. (364 aa)
Saro_2486GCN5-related N-acetyltransferase. (184 aa)
Saro_2618Periplasmic sensor signal transduction histidine kinase. (436 aa)
Saro_2627Multi-sensor hybrid histidine kinase. (1116 aa)
Saro_2664Glycosyl transferase, family 39. (439 aa)
Saro_2756Protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (346 aa)
Saro_2786Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (312 aa)
Saro_2794Hypothetical protein. (483 aa)
Saro_2905Hpr(Ser) kinase/phosphatase. (141 aa)
Saro_2906Periplasmic sensor signal transduction histidine kinase. (525 aa)
Saro_2971Protein serine/threonine phosphatase. (563 aa)
Saro_3050Conserved hypothetical protein. (213 aa)
Saro_3119Phage portal protein, HK97. (389 aa)
Saro_3224Protein-tyrosine kinase. (733 aa)
Saro_3243Hypothetical protein. (89 aa)
Saro_3244Hpr(Ser) kinase/phosphatase. (286 aa)
Saro_3247O-antigen polymerase. (452 aa)
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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