Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Saro_0175 | Saro_0176 | Saro_0175 | Saro_0176 | 5-oxoprolinase (ATP-hydrolyzing). | 5-oxoprolinase (ATP-hydrolyzing). | 0.999 |
| Saro_0176 | Saro_0175 | Saro_0176 | Saro_0175 | 5-oxoprolinase (ATP-hydrolyzing). | 5-oxoprolinase (ATP-hydrolyzing). | 0.999 |
| Saro_0594 | Saro_2257 | Saro_0594 | Saro_2257 | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | Putative uncharacterized protein involved in ubiquinone biosynthesis. | 0.412 |
| Saro_0594 | Saro_2789 | Saro_0594 | Saro_2789 | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. | 0.475 |
| Saro_0594 | Saro_2851 | Saro_0594 | Saro_2851 | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | RpsU-divergently transcribed. | 0.510 |
| Saro_0594 | ubiA | Saro_0594 | Saro_0951 | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.503 |
| Saro_0594 | ubiE | Saro_0594 | Saro_0595 | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.849 |
| Saro_0594 | ubiG | Saro_0594 | Saro_3303 | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.770 |
| Saro_1576 | Saro_2851 | Saro_1576 | Saro_2851 | Alternative oxidase. | RpsU-divergently transcribed. | 0.568 |
| Saro_1922 | Saro_2789 | Saro_1922 | Saro_2789 | Cyclase/dehydrase. | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. | 0.462 |
| Saro_1922 | ubiA | Saro_1922 | Saro_0951 | Cyclase/dehydrase. | 4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.493 |
| Saro_1922 | ubiG | Saro_1922 | Saro_3303 | Cyclase/dehydrase. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.668 |
| Saro_2257 | Saro_0594 | Saro_2257 | Saro_0594 | Putative uncharacterized protein involved in ubiquinone biosynthesis. | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.412 |
| Saro_2257 | Saro_2851 | Saro_2257 | Saro_2851 | Putative uncharacterized protein involved in ubiquinone biosynthesis. | RpsU-divergently transcribed. | 0.506 |
| Saro_2789 | Saro_0594 | Saro_2789 | Saro_0594 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.475 |
| Saro_2789 | Saro_1922 | Saro_2789 | Saro_1922 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. | Cyclase/dehydrase. | 0.462 |
| Saro_2789 | Saro_2851 | Saro_2789 | Saro_2851 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. | RpsU-divergently transcribed. | 0.464 |
| Saro_2789 | coq7 | Saro_2789 | Saro_0053 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. | Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | 0.532 |
| Saro_2789 | ubiA | Saro_2789 | Saro_0951 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. | 4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.601 |
| Saro_2789 | ubiE | Saro_2789 | Saro_0595 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.935 |
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