Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Saro_0211 | Saro_0704 | Saro_0211 | Saro_0704 | Glutamate dehydrogenase (NAD). | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.920 |
| Saro_0211 | Saro_3175 | Saro_0211 | Saro_3175 | Glutamate dehydrogenase (NAD). | Glutamate synthase (NADH) small subunit. | 0.908 |
| Saro_0211 | Saro_3176 | Saro_0211 | Saro_3176 | Glutamate dehydrogenase (NAD). | Glutamate synthase (NADH) large subunit. | 0.944 |
| Saro_0211 | astB | Saro_0211 | Saro_0882 | Glutamate dehydrogenase (NAD). | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.647 |
| Saro_0704 | Saro_0211 | Saro_0704 | Saro_0211 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate dehydrogenase (NAD). | 0.920 |
| Saro_0704 | Saro_3175 | Saro_0704 | Saro_3175 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate synthase (NADH) small subunit. | 0.932 |
| Saro_0704 | Saro_3176 | Saro_0704 | Saro_3176 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate synthase (NADH) large subunit. | 0.942 |
| Saro_0704 | Saro_3291 | Saro_0704 | Saro_3291 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Allosteric NADP-dependent malic enzyme. | 0.537 |
| Saro_0704 | aroA | Saro_0704 | Saro_1326 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.503 |
| Saro_0704 | astB | Saro_0704 | Saro_0882 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.460 |
| Saro_0884 | astB | Saro_0884 | Saro_0882 | Peptidase dimerization. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.900 |
| Saro_0884 | astD | Saro_0884 | Saro_0939 | Peptidase dimerization. | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.713 |
| Saro_1223 | Saro_2045 | Saro_1223 | Saro_2045 | L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. | L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. | 0.761 |
| Saro_1299 | Saro_3092 | Saro_1299 | Saro_3092 | FolC bifunctional protein; Belongs to the folylpolyglutamate synthase family. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. | 0.605 |
| Saro_1352 | Saro_3176 | Saro_1352 | Saro_3176 | Chorismate mutase. | Glutamate synthase (NADH) large subunit. | 0.412 |
| Saro_1352 | Saro_3291 | Saro_1352 | Saro_3291 | Chorismate mutase. | Allosteric NADP-dependent malic enzyme. | 0.420 |
| Saro_1352 | aroA | Saro_1352 | Saro_1326 | Chorismate mutase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.603 |
| Saro_1352 | aroC | Saro_1352 | Saro_0009 | Chorismate mutase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.954 |
| Saro_1352 | aroK | Saro_1352 | Saro_1900 | Chorismate mutase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.407 |
| Saro_1352 | dapA | Saro_1352 | Saro_1443 | Chorismate mutase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.552 |
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