STRINGSTRING
Saro_0450 Saro_0450 Saro_0542 Saro_0542 Saro_0789 Saro_0789 Saro_1503 Saro_1503 Saro_1505 Saro_1505 Saro_1611 Saro_1611 Saro_1654 Saro_1654 Saro_1655 Saro_1655 glgA glgA glgC glgC glgB glgB Saro_1659 Saro_1659 Saro_1719 Saro_1719 Saro_1729 Saro_1729 pgi pgi Saro_1879 Saro_1879 Saro_1885 Saro_1885 Saro_1891 Saro_1891 Saro_1892 Saro_1892 glk glk Saro_2419 Saro_2419
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Saro_0450UDP-glucose pyrophosphorylase. (312 aa)
Saro_0542Aryl-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (439 aa)
Saro_0789Aryl-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (443 aa)
Saro_1503Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (236 aa)
Saro_1505Trehalose 6-phosphate synthase. (464 aa)
Saro_1611Exo-1,4-beta-glucosidase. (811 aa)
Saro_1654Isoamylase; Belongs to the glycosyl hydrolase 13 family. (588 aa)
Saro_1655Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I. (542 aa)
glgAGlycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose. (485 aa)
glgCGlucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (419 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (721 aa)
Saro_1659Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (807 aa)
Saro_1719Glycoside hydrolase, family 3-like protein. (640 aa)
Saro_1729Beta-glucosidase. (737 aa)
pgiGlucose-6-phosphate isomerase. (507 aa)
Saro_1879Levansucrase; Belongs to the glycosyl hydrolase 68 family. (377 aa)
Saro_1885Fructokinase. (301 aa)
Saro_1891Alpha amylase, catalytic region. (544 aa)
Saro_1892Alpha-glucosidase. (682 aa)
glkGlucokinase; Belongs to the bacterial glucokinase family. (322 aa)
Saro_2419Beta-glucosidase. (849 aa)
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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